Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 AC068790.9-201ENST00000621669 2838 ntBASIC9.04□□□□□ -0.96
PCP4P48539 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC9.04□□□□□ -0.96
PCP4P48539 AL355355.2-201ENST00000442321 338 ntBASIC9.04□□□□□ -0.96
PCP4P48539 YBX1P10-201ENST00000444752 975 ntBASIC9.04□□□□□ -0.96
PCP4P48539 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC9.04□□□□□ -0.96
PCP4P48539 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC9.04□□□□□ -0.96
PCP4P48539 DUX4L11-201ENST00000611504 1267 ntBASIC9.04□□□□□ -0.96
PCP4P48539 DUX4L12-201ENST00000614593 1267 ntBASIC9.04□□□□□ -0.96
PCP4P48539 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 DUX4L14-201ENST00000621227 1267 ntBASIC9.04□□□□□ -0.96
PCP4P48539 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 ZFAT-216ENST00000523399 3734 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 ELP4-202ENST00000379163 1700 ntTSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 LCT-201ENST00000264162 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 SOSTDC1-201ENST00000307068 1869 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 ABCF1-202ENST00000376545 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 HOXB1-202ENST00000577092 1414 ntBASIC9.04□□□□□ -0.96
PCP4P48539 KRT8P49-201ENST00000604166 1432 ntBASIC9.04□□□□□ -0.96
PCP4P48539 ABCC11-203ENST00000394747 4862 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
PCP4P48539 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 STRADA-205ENST00000447001 2014 ntTSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 DCTN1-206ENST00000409868 4202 ntTSL 5 BASIC9.04□□□□□ -0.96
PCP4P48539 SREK1-202ENST00000334121 6781 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
PCP4P48539 SETD5-203ENST00000402198 6827 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 ESR2-208ENST00000554572 3588 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 FOS-208ENST00000555686 1496 ntTSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 TMEM59-201ENST00000234831 6691 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 GLP2R-201ENST00000262441 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 WSCD2-207ENST00000549903 3534 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 IL10RB-AS1-201ENST00000411998 2228 ntTSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 PC-208ENST00000529047 1607 ntTSL 3 BASIC9.03□□□□□ -0.96
PCP4P48539 OPTN-201ENST00000263036 2464 ntAPPRIS P2 TSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 NHP2-201ENST00000274606 865 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC9.03□□□□□ -0.96
PCP4P48539 CDV3P1-201ENST00000471403 739 ntBASIC9.03□□□□□ -0.96
PCP4P48539 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 AC010525.1-201ENST00000585559 441 ntBASIC9.03□□□□□ -0.96
PCP4P48539 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC9.03□□□□□ -0.96
PCP4P48539 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PCP4P48539 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 AL358472.5-202ENST00000641448 1267 ntBASIC9.03□□□□□ -0.96
PCP4P48539 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 AL133492.1-201ENST00000617854 3955 ntBASIC9.03□□□□□ -0.96
PCP4P48539 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 SCMH1-204ENST00000361705 3115 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 MYO9A-201ENST00000356056 12411 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 KRT8P39-201ENST00000396270 1433 ntBASIC9.03□□□□□ -0.96
PCP4P48539 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 C3orf36-201ENST00000408895 1668 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
PCP4P48539 ZNF23-202ENST00000358700 2692 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 EPHB2-202ENST00000374630 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 AP000708.1-201ENST00000527818 3423 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 DIP2A-202ENST00000417564 6967 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 COL14A1-201ENST00000247781 3450 ntTSL 5 BASIC9.03□□□□□ -0.96
PCP4P48539 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC9.03□□□□□ -0.96
PCP4P48539 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 LRRFIP1P1-201ENST00000498774 2246 ntBASIC9.03□□□□□ -0.96
PCP4P48539 AP003108.3-201ENST00000623765 2234 ntBASIC9.03□□□□□ -0.96
PCP4P48539 ZNF460-201ENST00000360338 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
PCP4P48539 CCDC40-204ENST00000397545 4294 ntAPPRIS P3 TSL 5 BASIC9.02□□□□□ -0.96
PCP4P48539 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.96
PCP4P48539 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PCP4P48539 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PCP4P48539 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC9.02□□□□□ -0.96
PCP4P48539 COL10A1-201ENST00000243222 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms