Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.93□□□□□ -0.02
RFC1P35251 AK2P2-201ENST00000439142 405 ntBASIC14.93□□□□□ -0.02
RFC1P35251 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.93□□□□□ -0.02
RFC1P35251 RN7SL277P-201ENST00000481521 288 ntBASIC14.93□□□□□ -0.02
RFC1P35251 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.93□□□□□ -0.02
RFC1P35251 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.93□□□□□ -0.02
RFC1P35251 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.93□□□□□ -0.02
RFC1P35251 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.93□□□□□ -0.02
RFC1P35251 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 BRD7P5-201ENST00000299197 1822 ntBASIC14.93□□□□□ -0.02
RFC1P35251 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.93□□□□□ -0.02
RFC1P35251 RCC2P1-201ENST00000452257 1476 ntBASIC14.93□□□□□ -0.02
RFC1P35251 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.93□□□□□ -0.02
RFC1P35251 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RFC1P35251 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC14.92□□□□□ -0.02
RFC1P35251 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RFC1P35251 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RFC1P35251 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
RFC1P35251 FAM86MP-201ENST00000340703 885 ntBASIC14.92□□□□□ -0.02
RFC1P35251 RN7SKP214-201ENST00000364208 315 ntBASIC14.92□□□□□ -0.02
RFC1P35251 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 AC011742.3-201ENST00000439053 820 ntBASIC14.92□□□□□ -0.02
RFC1P35251 CD164-210ENST00000512821 964 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
RFC1P35251 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.92□□□□□ -0.02
RFC1P35251 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.92□□□□□ -0.02
RFC1P35251 AC093752.3-201ENST00000567343 901 ntBASIC14.92□□□□□ -0.02
RFC1P35251 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.92□□□□□ -0.02
RFC1P35251 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.92□□□□□ -0.02
RFC1P35251 MIR4538-201ENST00000581377 78 ntBASIC14.92□□□□□ -0.02
RFC1P35251 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.92□□□□□ -0.02
RFC1P35251 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 KRT8P21-201ENST00000430398 1491 ntBASIC14.92□□□□□ -0.02
RFC1P35251 RPL13AP3-202ENST00000494676 1473 ntBASIC14.92□□□□□ -0.02
RFC1P35251 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 AC005014.1-201ENST00000432006 2976 ntBASIC14.92□□□□□ -0.02
RFC1P35251 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RFC1P35251 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RFC1P35251 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC14.92□□□□□ -0.02
RFC1P35251 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RFC1P35251 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RFC1P35251 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 LINC01165-201ENST00000445190 1623 ntBASIC14.92□□□□□ -0.02
RFC1P35251 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RFC1P35251 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 NCLP1-201ENST00000445357 1963 ntBASIC14.91□□□□□ -0.02
RFC1P35251 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms