Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC10.45□□□□□ -0.74
CKS2P33552 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC10.45□□□□□ -0.74
CKS2P33552 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 AC009336.2-201ENST00000468418 3521 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CKS2P33552 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS2P33552 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CKS2P33552 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS2P33552 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS2P33552 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
CKS2P33552 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC10.45□□□□□ -0.74
CKS2P33552 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CKS2P33552 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CKS2P33552 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 APOBR-201ENST00000431282 3765 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 SLC25A1P1-201ENST00000528351 927 ntBASIC10.44□□□□□ -0.74
CKS2P33552 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 AC005829.1-201ENST00000570002 483 ntBASIC10.44□□□□□ -0.74
CKS2P33552 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 SPDYE22P-201ENST00000582158 798 ntBASIC10.44□□□□□ -0.74
CKS2P33552 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 LINC02084-201ENST00000606069 1096 ntBASIC10.44□□□□□ -0.74
CKS2P33552 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 BX088702.1-201ENST00000610784 235 ntBASIC10.44□□□□□ -0.74
CKS2P33552 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC10.44□□□□□ -0.74
CKS2P33552 MVK-217ENST00000639206 367 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 USP39-207ENST00000450066 2086 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 GRIN2A-206ENST00000562109 4338 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC10.44□□□□□ -0.74
CKS2P33552 MEGF8-202ENST00000334370 10966 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC10.44□□□□□ -0.74
CKS2P33552 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
CKS2P33552 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC10.44□□□□□ -0.74
CKS2P33552 AP003969.2-201ENST00000623739 2275 ntBASIC10.44□□□□□ -0.74
CKS2P33552 GRM4-204ENST00000535756 6670 ntTSL 5 BASIC10.43□□□□□ -0.74
CKS2P33552 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.43□□□□□ -0.74
CKS2P33552 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
CKS2P33552 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms