Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 TCAM1P-207ENST00000485295 1537 ntBASIC12.17□□□□□ -0.46
CD40P25942 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC12.17□□□□□ -0.46
CD40P25942 AC092978.1-202ENST00000637590 1327 ntBASIC12.17□□□□□ -0.46
CD40P25942 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.17□□□□□ -0.46
CD40P25942 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD40P25942 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.17□□□□□ -0.46
CD40P25942 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.17□□□□□ -0.46
CD40P25942 AC092638.2-201ENST00000441105 947 ntBASIC12.17□□□□□ -0.46
CD40P25942 GRPEL2P1-201ENST00000453145 339 ntBASIC12.17□□□□□ -0.46
CD40P25942 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 AP003398.1-201ENST00000531124 318 ntBASIC12.17□□□□□ -0.46
CD40P25942 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC12.17□□□□□ -0.46
CD40P25942 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC12.17□□□□□ -0.46
CD40P25942 MIR4649-201ENST00000582839 64 ntBASIC12.17□□□□□ -0.46
CD40P25942 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.17□□□□□ -0.46
CD40P25942 AC007250.1-201ENST00000608934 338 ntBASIC12.17□□□□□ -0.46
CD40P25942 AP003419.4-201ENST00000616071 517 ntBASIC12.17□□□□□ -0.46
CD40P25942 AC073911.3-201ENST00000624401 631 ntBASIC12.17□□□□□ -0.46
CD40P25942 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.17□□□□□ -0.46
CD40P25942 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.17□□□□□ -0.46
CD40P25942 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CD40P25942 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CD40P25942 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CD40P25942 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.17□□□□□ -0.46
CD40P25942 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 AC152010.1-201ENST00000415779 2006 ntBASIC12.16□□□□□ -0.46
CD40P25942 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 AC068760.1-201ENST00000493579 1953 ntBASIC12.16□□□□□ -0.46
CD40P25942 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 FAM45BP-202ENST00000592932 1624 ntBASIC12.16□□□□□ -0.46
CD40P25942 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.16□□□□□ -0.46
CD40P25942 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CD40P25942 AC253536.4-201ENST00000440539 267 ntBASIC12.16□□□□□ -0.46
CD40P25942 RGS5-216ENST00000449680 788 ntTSL 3 BASIC12.16□□□□□ -0.46
CD40P25942 LDHBP1-201ENST00000455730 1119 ntBASIC12.16□□□□□ -0.46
CD40P25942 DPY19L2P5-201ENST00000456300 331 ntBASIC12.16□□□□□ -0.46
CD40P25942 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 TMCO5B-205ENST00000530020 894 ntBASIC12.16□□□□□ -0.46
CD40P25942 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.16□□□□□ -0.46
CD40P25942 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 CR383656.3-201ENST00000551315 183 ntBASIC12.16□□□□□ -0.46
CD40P25942 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.16□□□□□ -0.46
CD40P25942 MIR4265-201ENST00000582152 99 ntBASIC12.16□□□□□ -0.46
CD40P25942 GAS7-216ENST00000583882 553 ntTSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 AP005264.5-201ENST00000590066 467 ntBASIC12.16□□□□□ -0.46
CD40P25942 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.16□□□□□ -0.46
CD40P25942 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.16□□□□□ -0.46
CD40P25942 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CD40P25942 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CD40P25942 TBC1D27-202ENST00000424239 1573 ntBASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms