Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CD48P09326 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CD48P09326 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC14.64□□□□□ -0.07
CD48P09326 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CD48P09326 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 AC015909.3-201ENST00000572855 1794 ntBASIC14.63□□□□□ -0.07
CD48P09326 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 FAM86MP-201ENST00000340703 885 ntBASIC14.63□□□□□ -0.07
CD48P09326 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 AC016700.1-201ENST00000429424 312 ntBASIC14.63□□□□□ -0.07
CD48P09326 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 AC116345.2-201ENST00000512837 523 ntBASIC14.63□□□□□ -0.07
CD48P09326 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.63□□□□□ -0.07
CD48P09326 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC14.63□□□□□ -0.07
CD48P09326 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.63□□□□□ -0.07
CD48P09326 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.63□□□□□ -0.07
CD48P09326 AL022328.3-201ENST00000607943 679 ntBASIC14.63□□□□□ -0.07
CD48P09326 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC14.63□□□□□ -0.07
CD48P09326 MEG3_2.1-201ENST00000611456 105 ntBASIC14.63□□□□□ -0.07
CD48P09326 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
CD48P09326 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
CD48P09326 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CD48P09326 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.63□□□□□ -0.07
CD48P09326 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.62□□□□□ -0.07
CD48P09326 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.62□□□□□ -0.07
CD48P09326 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CD48P09326 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CD48P09326 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms