Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.62□□□□□ -0.39
APOC1P02654 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.62□□□□□ -0.39
APOC1P02654 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.62□□□□□ -0.39
APOC1P02654 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.62□□□□□ -0.39
APOC1P02654 HIST2H2BB-201ENST00000449108 381 ntBASIC12.62□□□□□ -0.39
APOC1P02654 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.62□□□□□ -0.39
APOC1P02654 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.62□□□□□ -0.39
APOC1P02654 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 AC140658.4-201ENST00000561990 352 ntBASIC12.62□□□□□ -0.39
APOC1P02654 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 AC244157.2-201ENST00000616239 1006 ntBASIC12.62□□□□□ -0.39
APOC1P02654 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
APOC1P02654 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
APOC1P02654 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.62□□□□□ -0.39
APOC1P02654 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 BX324167.2-201ENST00000623717 3316 ntBASIC12.61□□□□□ -0.39
APOC1P02654 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.61□□□□□ -0.39
APOC1P02654 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 AL157407.1-201ENST00000435784 904 ntBASIC12.61□□□□□ -0.39
APOC1P02654 AK2P2-201ENST00000439142 405 ntBASIC12.61□□□□□ -0.39
APOC1P02654 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.61□□□□□ -0.39
APOC1P02654 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 AL591471.1-201ENST00000621855 229 ntBASIC12.61□□□□□ -0.39
APOC1P02654 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
APOC1P02654 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 AC015818.8-201ENST00000587907 1519 ntBASIC12.61□□□□□ -0.39
APOC1P02654 REXO1L6P-201ENST00000603433 1515 ntBASIC12.61□□□□□ -0.39
APOC1P02654 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.61□□□□□ -0.39
APOC1P02654 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
APOC1P02654 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
APOC1P02654 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms