Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.45■□□□□ 0.86
SHANK1Q9Y566 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 AC009086.3-201ENST00000623486 1008 ntBASIC20.45■□□□□ 0.86
SHANK1Q9Y566 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK1Q9Y566 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.44■□□□□ 0.86
SHANK1Q9Y566 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.43■□□□□ 0.86
SHANK1Q9Y566 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SHANK1Q9Y566 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 IGHV3-19-201ENST00000521488 291 ntBASIC20.41■□□□□ 0.86
SHANK1Q9Y566 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
SHANK1Q9Y566 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 TERF1P2-201ENST00000583350 1212 ntBASIC20.4■□□□□ 0.86
SHANK1Q9Y566 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
SHANK1Q9Y566 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SHANK1Q9Y566 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.39■□□□□ 0.86
SHANK1Q9Y566 AL022069.1-201ENST00000568025 1636 ntBASIC20.39■□□□□ 0.86
SHANK1Q9Y566 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.39■□□□□ 0.86
SHANK1Q9Y566 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.39■□□□□ 0.85
SHANK1Q9Y566 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.39■□□□□ 0.85
SHANK1Q9Y566 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 MIR6084-201ENST00000622012 110 ntBASIC20.38■□□□□ 0.85
SHANK1Q9Y566 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SHANK1Q9Y566 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.37■□□□□ 0.85
SHANK1Q9Y566 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 SLC6A10P-202ENST00000431994 2058 ntBASIC20.36■□□□□ 0.85
SHANK1Q9Y566 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 AL354811.1-201ENST00000610286 706 ntBASIC20.36■□□□□ 0.85
SHANK1Q9Y566 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SHANK1Q9Y566 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms