Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
RNF11Q9Y3C5 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RNF11Q9Y3C5 LINC00565-201ENST00000562710 2331 ntBASIC21.89■■□□□ 1.1
RNF11Q9Y3C5 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.89■■□□□ 1.1
RNF11Q9Y3C5 AC137630.3-201ENST00000607245 391 ntBASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 DUSP8P3-201ENST00000399571 1760 ntBASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RNF11Q9Y3C5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 EP400NL-214ENST00000641289 2402 ntBASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 SNX5-217ENST00000606557 1087 ntBASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RNF11Q9Y3C5 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RNF11Q9Y3C5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.86■■□□□ 1.09
RNF11Q9Y3C5 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.85■■□□□ 1.09
RNF11Q9Y3C5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF11Q9Y3C5 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF11Q9Y3C5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF11Q9Y3C5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF11Q9Y3C5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF11Q9Y3C5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF11Q9Y3C5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF11Q9Y3C5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms