Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
UBQLN4Q9NRR5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.68■□□□□ 0.9
UBQLN4Q9NRR5 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 AC079630.1-202ENST00000618127 1840 ntBASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 AL356441.2-201ENST00000443009 864 ntBASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBQLN4Q9NRR5 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBQLN4Q9NRR5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 AC009102.2-201ENST00000606772 1639 ntBASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 AL356740.2-201ENST00000601559 647 ntBASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBQLN4Q9NRR5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
UBQLN4Q9NRR5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 AC144652.1-201ENST00000609974 1624 ntBASIC20.64■□□□□ 0.89
UBQLN4Q9NRR5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 DUSP8P3-201ENST00000399571 1760 ntBASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.63■□□□□ 0.89
UBQLN4Q9NRR5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 MIR3621-201ENST00000580529 85 ntBASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 AL117332.1-201ENST00000622628 974 ntBASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
UBQLN4Q9NRR5 FP325331.1-202ENST00000623531 1380 ntBASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBQLN4Q9NRR5 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN4Q9NRR5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.6■□□□□ 0.89
UBQLN4Q9NRR5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBQLN4Q9NRR5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms