Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.46■■■□□ 2.63
TULP4Q9NRJ4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TULP4Q9NRJ4 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TULP4Q9NRJ4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
TULP4Q9NRJ4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.62
TULP4Q9NRJ4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.45■■■□□ 2.62
TULP4Q9NRJ4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TULP4Q9NRJ4 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 pRNA.6-201ENST00000610482 90 ntBASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 pRNA.5-201ENST00000612139 90 ntBASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 pRNA.11-201ENST00000618423 90 ntBASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 pRNA.13-201ENST00000619112 90 ntBASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC31.43■■■□□ 2.62
TULP4Q9NRJ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 YBX1P1-201ENST00000445822 960 ntBASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.42■■■□□ 2.62
TULP4Q9NRJ4 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 AC027612.3-201ENST00000413684 1047 ntBASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
TULP4Q9NRJ4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TULP4Q9NRJ4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TULP4Q9NRJ4 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC31.4■■■□□ 2.62
TULP4Q9NRJ4 KRT18P5-201ENST00000436075 1291 ntBASIC31.39■■■□□ 2.62
TULP4Q9NRJ4 AC034268.1-201ENST00000441047 882 ntBASIC31.39■■■□□ 2.62
TULP4Q9NRJ4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC31.39■■■□□ 2.62
TULP4Q9NRJ4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC31.39■■■□□ 2.62
TULP4Q9NRJ4 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
TULP4Q9NRJ4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TULP4Q9NRJ4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
TULP4Q9NRJ4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TULP4Q9NRJ4 TSPY26P-201ENST00000476365 1326 ntBASIC31.38■■■□□ 2.61
TULP4Q9NRJ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
TULP4Q9NRJ4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
TULP4Q9NRJ4 AC141586.4-201ENST00000624558 1573 ntBASIC31.36■■■□□ 2.61
TULP4Q9NRJ4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
TULP4Q9NRJ4 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TULP4Q9NRJ4 IGHV3-19-201ENST00000521488 291 ntBASIC31.35■■■□□ 2.61
TULP4Q9NRJ4 AC126544.1-201ENST00000580842 1059 ntBASIC31.35■■■□□ 2.61
TULP4Q9NRJ4 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
TULP4Q9NRJ4 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
TULP4Q9NRJ4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L2-201ENST00000561772 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L6-201ENST00000626483 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L1-201ENST00000627662 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L8-201ENST00000629013 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L3-201ENST00000630187 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L7-201ENST00000630678 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 DUX4L5-201ENST00000630834 1275 ntBASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
TULP4Q9NRJ4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 IKBKGP1-201ENST00000612193 1073 ntBASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
TULP4Q9NRJ4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms