Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SH2D2AQ9NP31 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 AC011298.3-201ENST00000615796 283 ntBASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 FP325331.1-202ENST00000623531 1380 ntBASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SH2D2AQ9NP31 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 MIR3181-201ENST00000578512 73 ntBASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SH2D2AQ9NP31 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 EDA-201ENST00000338901 1233 ntBASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SH2D2AQ9NP31 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 SUDS3P1-201ENST00000505831 966 ntBASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 MIR4767-201ENST00000582827 78 ntBASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 AC144652.1-201ENST00000609974 1624 ntBASIC20.52■□□□□ 0.88
SH2D2AQ9NP31 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SH2D2AQ9NP31 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 DUX4L4-201ENST00000566884 1269 ntBASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 AC136469.2-201ENST00000623944 1028 ntBASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SH2D2AQ9NP31 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 AL355001.2-201ENST00000620617 1191 ntBASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SH2D2AQ9NP31 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 pRNA.6-201ENST00000610482 90 ntBASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 pRNA.5-201ENST00000612139 90 ntBASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 pRNA.11-201ENST00000618423 90 ntBASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 pRNA.13-201ENST00000619112 90 ntBASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SH2D2AQ9NP31 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 AL499627.2-201ENST00000606283 725 ntBASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SH2D2AQ9NP31 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SH2D2AQ9NP31 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SH2D2AQ9NP31 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms