Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.05■■□□□ 1.28
ATP13A1Q9HD20 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.04■■□□□ 1.28
ATP13A1Q9HD20 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATP13A1Q9HD20 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.02■■□□□ 1.28
ATP13A1Q9HD20 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATP13A1Q9HD20 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23■■□□□ 1.27
ATP13A1Q9HD20 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23■■□□□ 1.27
ATP13A1Q9HD20 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATP13A1Q9HD20 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ATP13A1Q9HD20 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
ATP13A1Q9HD20 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 AC099791.2-201ENST00000605725 427 ntBASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATP13A1Q9HD20 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 AC092171.4-201ENST00000609130 632 ntBASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATP13A1Q9HD20 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 AC096631.2-201ENST00000436136 790 ntBASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 AC241377.3-202ENST00000626088 1088 ntBASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 AC241585.3-202ENST00000628937 1088 ntBASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 AC245100.8-202ENST00000629247 1058 ntBASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.97■■□□□ 1.27
ATP13A1Q9HD20 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
ATP13A1Q9HD20 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.96■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms