Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF304Q9HCX3 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF304Q9HCX3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.31■■□□□ 1
ZNF304Q9HCX3 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF304Q9HCX3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ZNF304Q9HCX3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.31■■□□□ 1
ZNF304Q9HCX3 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 AC004812.2-201ENST00000611079 2094 ntBASIC21.3■■□□□ 1
ZNF304Q9HCX3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 AC024257.2-201ENST00000549699 147 ntBASIC21.3■■□□□ 1
ZNF304Q9HCX3 AC005837.3-201ENST00000612163 286 ntBASIC21.3■■□□□ 1
ZNF304Q9HCX3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.3■■□□□ 1
ZNF304Q9HCX3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.29■■□□□ 1
ZNF304Q9HCX3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF304Q9HCX3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ZNF304Q9HCX3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF304Q9HCX3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ZNF304Q9HCX3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF304Q9HCX3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.28■■□□□ 1
ZNF304Q9HCX3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.28■■□□□ 1
ZNF304Q9HCX3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.28■■□□□ 1
ZNF304Q9HCX3 AC009086.3-201ENST00000623486 1008 ntBASIC21.28■■□□□ 1
ZNF304Q9HCX3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.28■■□□□ 1
ZNF304Q9HCX3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF304Q9HCX3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ZNF304Q9HCX3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ZNF304Q9HCX3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF304Q9HCX3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF304Q9HCX3 SERBP1P1-201ENST00000396021 1160 ntBASIC21.27■■□□□ 1
ZNF304Q9HCX3 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.27■■□□□ 1
ZNF304Q9HCX3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ZNF304Q9HCX3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.27■■□□□ 1
ZNF304Q9HCX3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.27■■□□□ 1
ZNF304Q9HCX3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.27■□□□□ 0.99
ZNF304Q9HCX3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
ZNF304Q9HCX3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ZNF304Q9HCX3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.27■□□□□ 0.99
ZNF304Q9HCX3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
ZNF304Q9HCX3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 AL138724.1-201ENST00000606771 1088 ntBASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.26■□□□□ 0.99
ZNF304Q9HCX3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 AC006455.2-201ENST00000429931 906 ntBASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.25■□□□□ 0.99
ZNF304Q9HCX3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 EDA-201ENST00000338901 1233 ntBASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ZNF304Q9HCX3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 AC011298.3-201ENST00000615796 283 ntBASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ZNF304Q9HCX3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ZNF304Q9HCX3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms