Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ATP6V0A4Q9HBG4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ATP6V0A4Q9HBG4 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.02■■□□□ 1.6
ATP6V0A4Q9HBG4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC25.02■■□□□ 1.6
ATP6V0A4Q9HBG4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.02■■□□□ 1.6
ATP6V0A4Q9HBG4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A4Q9HBG4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A4Q9HBG4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ATP6V0A4Q9HBG4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.01■■□□□ 1.59
ATP6V0A4Q9HBG4 AC024257.2-201ENST00000549699 147 ntBASIC25.01■■□□□ 1.59
ATP6V0A4Q9HBG4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 AL031432.3-201ENST00000607698 485 ntBASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
ATP6V0A4Q9HBG4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 ZNRF2P3-201ENST00000424200 374 ntBASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 SUDS3P1-201ENST00000505831 966 ntBASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 AC099791.2-201ENST00000605725 427 ntBASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 AC092171.4-201ENST00000609130 632 ntBASIC24.99■■□□□ 1.59
ATP6V0A4Q9HBG4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 EDA-201ENST00000338901 1233 ntBASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 DUX4L19-201ENST00000557448 1267 ntBASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.98■■□□□ 1.59
ATP6V0A4Q9HBG4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 AL355001.2-201ENST00000620617 1191 ntBASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 AC241377.3-202ENST00000626088 1088 ntBASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 AC241585.3-202ENST00000628937 1088 ntBASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 AC245100.8-202ENST00000629247 1058 ntBASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.97■■□□□ 1.59
ATP6V0A4Q9HBG4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
ATP6V0A4Q9HBG4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
ATP6V0A4Q9HBG4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
ATP6V0A4Q9HBG4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A4Q9HBG4 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A4Q9HBG4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
ATP6V0A4Q9HBG4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.95■■□□□ 1.58
ATP6V0A4Q9HBG4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
ATP6V0A4Q9HBG4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
ATP6V0A4Q9HBG4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 AC009086.3-201ENST00000623486 1008 ntBASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 SYT6-210ENST00000641643 1587 ntBASIC24.93■■□□□ 1.58
ATP6V0A4Q9HBG4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
ATP6V0A4Q9HBG4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATP6V0A4Q9HBG4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATP6V0A4Q9HBG4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
ATP6V0A4Q9HBG4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms