Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH2D4AQ9H788 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
SH2D4AQ9H788 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
SH2D4AQ9H788 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 MPST-208ENST00000628507 698 ntTSL 5 BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH2D4AQ9H788 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.3■■□□□ 1.8
SH2D4AQ9H788 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.3■■□□□ 1.8
SH2D4AQ9H788 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 AC026271.2-201ENST00000428091 497 ntBASIC26.29■■□□□ 1.8
SH2D4AQ9H788 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SH2D4AQ9H788 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
SH2D4AQ9H788 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
SH2D4AQ9H788 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.27■■□□□ 1.8
SH2D4AQ9H788 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SH2D4AQ9H788 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
SH2D4AQ9H788 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.27■■□□□ 1.8
SH2D4AQ9H788 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH2D4AQ9H788 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
SH2D4AQ9H788 IRS3P-201ENST00000223076 1006 ntBASIC26.26■■□□□ 1.79
SH2D4AQ9H788 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH2D4AQ9H788 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.26■■□□□ 1.79
SH2D4AQ9H788 MIR5787-201ENST00000611784 55 ntBASIC26.26■■□□□ 1.79
SH2D4AQ9H788 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SH2D4AQ9H788 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SH2D4AQ9H788 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 GRAMD4P2-201ENST00000423297 1097 ntBASIC26.24■■□□□ 1.79
SH2D4AQ9H788 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 EI24-213ENST00000618552 1747 ntTSL 5 BASIC26.24■■□□□ 1.79
SH2D4AQ9H788 FP325331.1-202ENST00000623531 1380 ntBASIC26.23■■□□□ 1.79
SH2D4AQ9H788 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
SH2D4AQ9H788 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
SH2D4AQ9H788 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SH2D4AQ9H788 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH2D4AQ9H788 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
SH2D4AQ9H788 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SH2D4AQ9H788 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms