Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.63■□□□□ 0.89
TRIM2Q9C040 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRIM2Q9C040 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TRIM2Q9C040 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM2Q9C040 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM2Q9C040 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.62■□□□□ 0.89
TRIM2Q9C040 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
TRIM2Q9C040 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 GUSBP5-201ENST00000418136 578 ntBASIC20.62■□□□□ 0.89
TRIM2Q9C040 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRIM2Q9C040 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 BX664725.1-201ENST00000438252 379 ntBASIC20.61■□□□□ 0.89
TRIM2Q9C040 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRIM2Q9C040 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
TRIM2Q9C040 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 C9orf163-202ENST00000624034 2573 ntBASIC20.6■□□□□ 0.89
TRIM2Q9C040 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
TRIM2Q9C040 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRIM2Q9C040 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM2Q9C040 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM2Q9C040 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM2Q9C040 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
TRIM2Q9C040 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM2Q9C040 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRIM2Q9C040 AC021242.3-201ENST00000607598 1377 ntBASIC20.59■□□□□ 0.89
TRIM2Q9C040 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM2Q9C040 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM2Q9C040 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.58■□□□□ 0.89
TRIM2Q9C040 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM2Q9C040 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM2Q9C040 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRIM2Q9C040 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
TRIM2Q9C040 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM2Q9C040 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.58■□□□□ 0.88
TRIM2Q9C040 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.58■□□□□ 0.88
TRIM2Q9C040 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM2Q9C040 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM2Q9C040 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.58■□□□□ 0.88
TRIM2Q9C040 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRIM2Q9C040 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.58■□□□□ 0.88
TRIM2Q9C040 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM2Q9C040 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM2Q9C040 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 Z92544.1-202ENST00000571933 1220 ntBASIC20.57■□□□□ 0.88
TRIM2Q9C040 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM2Q9C040 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 MIR6722-201ENST00000617286 78 ntBASIC20.57■□□□□ 0.88
TRIM2Q9C040 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.57■□□□□ 0.88
TRIM2Q9C040 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM2Q9C040 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRIM2Q9C040 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM2Q9C040 AC079630.1-202ENST00000618127 1840 ntBASIC20.56■□□□□ 0.88
TRIM2Q9C040 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM2Q9C040 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.56■□□□□ 0.88
TRIM2Q9C040 AC239859.2-201ENST00000444165 318 ntBASIC20.56■□□□□ 0.88
TRIM2Q9C040 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM2Q9C040 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRIM2Q9C040 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRIM2Q9C040 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms