Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 AC044849.2-201ENST00000606596 710 ntBASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
SEC22CQ9BRL7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 AC139530.1-201ENST00000575312 1977 ntBASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 AC092053.2-201ENST00000640557 1818 ntBASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SEC22CQ9BRL7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SEC22CQ9BRL7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L13-201ENST00000554103 1267 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 AP006261.1-201ENST00000584783 668 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L15-201ENST00000611059 1267 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L23-201ENST00000615195 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L24-201ENST00000617576 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L22-201ENST00000618238 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L20-201ENST00000619712 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L21-201ENST00000622058 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L10-201ENST00000622460 1267 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 DUX4L25-201ENST00000624915 1269 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 AC026310.3-201ENST00000625186 2373 ntBASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SEC22CQ9BRL7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 AC126177.7-201ENST00000547904 679 ntBASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEC22CQ9BRL7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SEC22CQ9BRL7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEC22CQ9BRL7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms