Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
RAB40CQ96S21 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
RAB40CQ96S21 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RAB40CQ96S21 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40CQ96S21 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40CQ96S21 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40CQ96S21 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40CQ96S21 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
RAB40CQ96S21 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RAB40CQ96S21 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB40CQ96S21 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40CQ96S21 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RAB40CQ96S21 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RAB40CQ96S21 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.19■□□□□ 0.5
RAB40CQ96S21 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 GPX1-201ENST00000419349 1106 ntBASIC18.18■□□□□ 0.5
RAB40CQ96S21 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 AC007375.3-201ENST00000600936 2314 ntBASIC18.18■□□□□ 0.5
RAB40CQ96S21 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RAB40CQ96S21 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.18■□□□□ 0.5
RAB40CQ96S21 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.17■□□□□ 0.5
RAB40CQ96S21 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
RAB40CQ96S21 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RAB40CQ96S21 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.17■□□□□ 0.5
RAB40CQ96S21 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
RAB40CQ96S21 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RAB40CQ96S21 ALDH1A3-203ENST00000557963 1670 ntBASIC18.16■□□□□ 0.5
RAB40CQ96S21 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40CQ96S21 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 AL592295.1-201ENST00000400984 884 ntBASIC18.16■□□□□ 0.5
RAB40CQ96S21 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 ABHD17AP3-201ENST00000503096 1137 ntBASIC18.16■□□□□ 0.5
RAB40CQ96S21 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40CQ96S21 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40CQ96S21 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40CQ96S21 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.16■□□□□ 0.5
RAB40CQ96S21 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RAB40CQ96S21 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAB40CQ96S21 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RAB40CQ96S21 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms