Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.38■□□□□ 0.69
CMTM3Q96MX0 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 RAP2CP1-202ENST00000605179 643 ntBASIC19.37■□□□□ 0.69
CMTM3Q96MX0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CMTM3Q96MX0 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CMTM3Q96MX0 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 MIR3648-2-201ENST00000581792 180 ntBASIC19.35■□□□□ 0.69
CMTM3Q96MX0 AC026202.3-201ENST00000600805 1127 ntBASIC19.35■□□□□ 0.69
CMTM3Q96MX0 MIR3648-1-201ENST00000615959 180 ntBASIC19.35■□□□□ 0.69
CMTM3Q96MX0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CMTM3Q96MX0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CMTM3Q96MX0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CMTM3Q96MX0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.33■□□□□ 0.68
CMTM3Q96MX0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.32■□□□□ 0.68
CMTM3Q96MX0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 FBXW4P1-201ENST00000426721 2239 ntBASIC19.31■□□□□ 0.68
CMTM3Q96MX0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 AL592295.1-201ENST00000400984 884 ntBASIC19.31■□□□□ 0.68
CMTM3Q96MX0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 AC007029.1-201ENST00000604183 313 ntBASIC19.31■□□□□ 0.68
CMTM3Q96MX0 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CMTM3Q96MX0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms