Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 MIR4508-201ENST00000584178 70 ntBASIC22.32■■□□□ 1.16
PTCD3Q96EY7 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PTCD3Q96EY7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 KRT18P24-201ENST00000344739 1156 ntBASIC22.31■■□□□ 1.16
PTCD3Q96EY7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 AC120024.1-201ENST00000562672 995 ntBASIC22.31■■□□□ 1.16
PTCD3Q96EY7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PTCD3Q96EY7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
PTCD3Q96EY7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 THA1P-201ENST00000590384 1145 ntBASIC22.29■■□□□ 1.16
PTCD3Q96EY7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PTCD3Q96EY7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PTCD3Q96EY7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PTCD3Q96EY7 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 YBX1P4-201ENST00000392794 808 ntBASIC22.26■■□□□ 1.15
PTCD3Q96EY7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 AC103834.1-201ENST00000520383 144 ntBASIC22.26■■□□□ 1.15
PTCD3Q96EY7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PTCD3Q96EY7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 AL161729.1-201ENST00000604104 1402 ntBASIC22.25■■□□□ 1.15
PTCD3Q96EY7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PTCD3Q96EY7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms