Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.9■□□□□ 0.78
APH1AQ96BI3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
APH1AQ96BI3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APH1AQ96BI3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APH1AQ96BI3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.89■□□□□ 0.77
APH1AQ96BI3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
APH1AQ96BI3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
APH1AQ96BI3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
APH1AQ96BI3 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
APH1AQ96BI3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
APH1AQ96BI3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
APH1AQ96BI3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.88■□□□□ 0.77
APH1AQ96BI3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.88■□□□□ 0.77
APH1AQ96BI3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
APH1AQ96BI3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 DUX4L19-201ENST00000557448 1267 ntBASIC19.87■□□□□ 0.77
APH1AQ96BI3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 AC099791.2-201ENST00000605725 427 ntBASIC19.87■□□□□ 0.77
APH1AQ96BI3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
APH1AQ96BI3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.87■□□□□ 0.77
APH1AQ96BI3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
APH1AQ96BI3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APH1AQ96BI3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
APH1AQ96BI3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
APH1AQ96BI3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APH1AQ96BI3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
APH1AQ96BI3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 AC009086.3-201ENST00000623486 1008 ntBASIC19.85■□□□□ 0.77
APH1AQ96BI3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
APH1AQ96BI3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
APH1AQ96BI3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 AC096631.2-201ENST00000436136 790 ntBASIC19.84■□□□□ 0.77
APH1AQ96BI3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
APH1AQ96BI3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
APH1AQ96BI3 AC144652.1-201ENST00000609974 1624 ntBASIC19.84■□□□□ 0.77
APH1AQ96BI3 FP325331.1-202ENST00000623531 1380 ntBASIC19.83■□□□□ 0.77
APH1AQ96BI3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
APH1AQ96BI3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
APH1AQ96BI3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.83■□□□□ 0.77
APH1AQ96BI3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.83■□□□□ 0.77
APH1AQ96BI3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.83■□□□□ 0.77
APH1AQ96BI3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
APH1AQ96BI3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
APH1AQ96BI3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
APH1AQ96BI3 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.83■□□□□ 0.76
APH1AQ96BI3 SYT6-210ENST00000641643 1587 ntBASIC19.83■□□□□ 0.76
APH1AQ96BI3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.83■□□□□ 0.76
APH1AQ96BI3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APH1AQ96BI3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APH1AQ96BI3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APH1AQ96BI3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms