Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 MIR6722-201ENST00000617286 78 ntBASIC19.67■□□□□ 0.74
SPTSSAQ969W0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SPTSSAQ969W0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 AC068473.5-201ENST00000616428 2072 ntBASIC19.66■□□□□ 0.74
SPTSSAQ969W0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.66■□□□□ 0.74
SPTSSAQ969W0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 AC005703.6-201ENST00000623265 1329 ntBASIC19.65■□□□□ 0.74
SPTSSAQ969W0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPTSSAQ969W0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPTSSAQ969W0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPTSSAQ969W0 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPTSSAQ969W0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 AC092028.1-203ENST00000608262 953 ntBASIC19.64■□□□□ 0.73
SPTSSAQ969W0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SPTSSAQ969W0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SPTSSAQ969W0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SPTSSAQ969W0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 MIR4787-201ENST00000607364 84 ntBASIC19.61■□□□□ 0.73
SPTSSAQ969W0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SPTSSAQ969W0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 AC079630.1-202ENST00000618127 1840 ntBASIC19.6■□□□□ 0.73
SPTSSAQ969W0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 AC239859.2-201ENST00000444165 318 ntBASIC19.6■□□□□ 0.73
SPTSSAQ969W0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 MTDHP2-201ENST00000601468 714 ntBASIC19.6■□□□□ 0.73
SPTSSAQ969W0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPTSSAQ969W0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 AC009299.2-201ENST00000482477 511 ntBASIC19.59■□□□□ 0.73
SPTSSAQ969W0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
SPTSSAQ969W0 AC133561.1-201ENST00000568600 2415 ntBASIC19.59■□□□□ 0.73
SPTSSAQ969W0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.58■□□□□ 0.73
SPTSSAQ969W0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.58■□□□□ 0.73
SPTSSAQ969W0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SPTSSAQ969W0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms