Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
U2AF1L4Q8WU68 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.75■■□□□ 1.71
U2AF1L4Q8WU68 NTF6G-201ENST00000591094 616 ntBASIC25.75■■□□□ 1.71
U2AF1L4Q8WU68 AC009086.3-201ENST00000623486 1008 ntBASIC25.75■■□□□ 1.71
U2AF1L4Q8WU68 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
U2AF1L4Q8WU68 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 CCDC92B-201ENST00000575506 885 ntBASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.74■■□□□ 1.71
U2AF1L4Q8WU68 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 AC131274.2-201ENST00000580697 1507 ntBASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 MIR6084-201ENST00000622012 110 ntBASIC25.73■■□□□ 1.71
U2AF1L4Q8WU68 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 AC097639.1-201ENST00000565519 1891 ntBASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
U2AF1L4Q8WU68 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
U2AF1L4Q8WU68 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
U2AF1L4Q8WU68 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
U2AF1L4Q8WU68 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.71
U2AF1L4Q8WU68 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.7■■□□□ 1.71
U2AF1L4Q8WU68 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
U2AF1L4Q8WU68 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
U2AF1L4Q8WU68 ESRRAP2-201ENST00000418437 1549 ntBASIC25.7■■□□□ 1.7
U2AF1L4Q8WU68 ME3-201ENST00000323418 1068 ntTSL 5 BASIC25.7■■□□□ 1.7
U2AF1L4Q8WU68 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.7■■□□□ 1.7
U2AF1L4Q8WU68 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
U2AF1L4Q8WU68 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 AICDA-202ENST00000537228 667 ntTSL 5 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 TK2-208ENST00000545043 1120 ntTSL 2 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.69■■□□□ 1.7
U2AF1L4Q8WU68 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
U2AF1L4Q8WU68 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
U2AF1L4Q8WU68 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 AC012414.1-201ENST00000556676 535 ntBASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
U2AF1L4Q8WU68 AC142381.3-201ENST00000568208 1670 ntBASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 MIR572-201ENST00000384983 95 ntBASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 KRT18P14-201ENST00000534205 1250 ntBASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.65■■□□□ 1.7
U2AF1L4Q8WU68 AC022211.4-201ENST00000625094 2161 ntBASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms