Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 AP003733.4-201ENST00000623785 1697 ntBASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SHCBP1Q8NEM2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.76■■□□□ 1.72
SHCBP1Q8NEM2 KRT18P5-201ENST00000436075 1291 ntBASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
SHCBP1Q8NEM2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHCBP1Q8NEM2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHCBP1Q8NEM2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHCBP1Q8NEM2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
SHCBP1Q8NEM2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SHCBP1Q8NEM2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L2-201ENST00000561772 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 AC022517.1-201ENST00000592429 346 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L6-201ENST00000626483 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L1-201ENST00000627662 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L8-201ENST00000629013 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L3-201ENST00000630187 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L7-201ENST00000630678 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L5-201ENST00000630834 1275 ntBASIC25.74■■□□□ 1.71
SHCBP1Q8NEM2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 FP325331.1-202ENST00000623531 1380 ntBASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 AC012414.1-201ENST00000556676 535 ntBASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
SHCBP1Q8NEM2 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 OR2I1P-207ENST00000453522 948 ntBASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 AL354811.1-201ENST00000610286 706 ntBASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
SHCBP1Q8NEM2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 DUX4L4-201ENST00000566884 1269 ntBASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC25.71■■□□□ 1.71
SHCBP1Q8NEM2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
SHCBP1Q8NEM2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
SHCBP1Q8NEM2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 AC022211.4-201ENST00000625094 2161 ntBASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 RARRES2P11-201ENST00000635158 484 ntBASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
SHCBP1Q8NEM2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SHCBP1Q8NEM2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms