Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 BX664725.1-201ENST00000438252 379 ntBASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ZNF439Q8NDP4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ZNF439Q8NDP4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
ZNF439Q8NDP4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.52■□□□□ 0.55
ZNF439Q8NDP4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 AC133561.1-201ENST00000568600 2415 ntBASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.51■□□□□ 0.55
ZNF439Q8NDP4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 DUSP8P3-201ENST00000399571 1760 ntBASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 Z92544.1-202ENST00000571933 1220 ntBASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 MIR6722-201ENST00000617286 78 ntBASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ZNF439Q8NDP4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms