Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC35.67■■■■□ 3.3
CFAP43Q8NDM7 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC35.67■■■■□ 3.3
CFAP43Q8NDM7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC35.67■■■■□ 3.3
CFAP43Q8NDM7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC35.67■■■■□ 3.3
CFAP43Q8NDM7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CFAP43Q8NDM7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CFAP43Q8NDM7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC35.66■■■■□ 3.3
CFAP43Q8NDM7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC35.66■■■■□ 3.3
CFAP43Q8NDM7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC35.66■■■■□ 3.3
CFAP43Q8NDM7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 AC012414.1-201ENST00000556676 535 ntBASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 AC142381.3-201ENST00000568208 1670 ntBASIC35.65■■■■□ 3.3
CFAP43Q8NDM7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC35.64■■■■□ 3.3
CFAP43Q8NDM7 AC138932.3-201ENST00000567634 1902 ntBASIC35.63■■■■□ 3.3
CFAP43Q8NDM7 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CFAP43Q8NDM7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC35.63■■■■□ 3.29
CFAP43Q8NDM7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC35.63■■■■□ 3.29
CFAP43Q8NDM7 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
CFAP43Q8NDM7 MED17-227ENST00000640521 2047 ntTSL 5 BASIC35.62■■■■□ 3.29
CFAP43Q8NDM7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC35.62■■■■□ 3.29
CFAP43Q8NDM7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CFAP43Q8NDM7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC35.62■■■■□ 3.29
CFAP43Q8NDM7 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC35.62■■■■□ 3.29
CFAP43Q8NDM7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC35.61■■■■□ 3.29
CFAP43Q8NDM7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC35.61■■■■□ 3.29
CFAP43Q8NDM7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
CFAP43Q8NDM7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC35.61■■■■□ 3.29
CFAP43Q8NDM7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC35.61■■■■□ 3.29
CFAP43Q8NDM7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC35.6■■■■□ 3.29
CFAP43Q8NDM7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC35.6■■■■□ 3.29
CFAP43Q8NDM7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CFAP43Q8NDM7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CFAP43Q8NDM7 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 AL358852.1-201ENST00000623174 1268 ntBASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 TSPY26P-201ENST00000476365 1326 ntBASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CFAP43Q8NDM7 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC35.58■■■■□ 3.29
CFAP43Q8NDM7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CFAP43Q8NDM7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC35.58■■■■□ 3.29
CFAP43Q8NDM7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC35.58■■■■□ 3.29
CFAP43Q8NDM7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.29
CFAP43Q8NDM7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 CCDC92B-201ENST00000575506 885 ntBASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
CFAP43Q8NDM7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CFAP43Q8NDM7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CFAP43Q8NDM7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC35.56■■■■□ 3.28
CFAP43Q8NDM7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CFAP43Q8NDM7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CFAP43Q8NDM7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 AC009086.3-201ENST00000623486 1008 ntBASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 ALDH1A3-203ENST00000557963 1670 ntBASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CFAP43Q8NDM7 NME4-202ENST00000382940 766 ntTSL 3 BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 AC020928.2-201ENST00000588717 2197 ntBASIC35.54■■■■□ 3.28
CFAP43Q8NDM7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 MIR3181-201ENST00000578512 73 ntBASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 AC126544.1-201ENST00000580842 1059 ntBASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
CFAP43Q8NDM7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC35.52■■■■□ 3.28
CFAP43Q8NDM7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CFAP43Q8NDM7 KRT18P14-201ENST00000534205 1250 ntBASIC35.52■■■■□ 3.28
CFAP43Q8NDM7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms