Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 DUSP8P3-201ENST00000399571 1760 ntBASIC23.85■■□□□ 1.41
TMEM35BQ8NCS4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.85■■□□□ 1.41
TMEM35BQ8NCS4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TMEM35BQ8NCS4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 MIR6724-1-201ENST00000616420 92 ntBASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 MIR6724-2-201ENST00000616483 92 ntBASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 MIR6724-4-201ENST00000617390 92 ntBASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 MIR6724-3-201ENST00000622482 92 ntBASIC23.83■■□□□ 1.41
TMEM35BQ8NCS4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
TMEM35BQ8NCS4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.83■■□□□ 1.4
TMEM35BQ8NCS4 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 KRT16P3-201ENST00000439127 1283 ntBASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TMEM35BQ8NCS4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TMEM35BQ8NCS4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TMEM35BQ8NCS4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
TMEM35BQ8NCS4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TMEM35BQ8NCS4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 AC144652.1-201ENST00000609974 1624 ntBASIC23.77■■□□□ 1.4
TMEM35BQ8NCS4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
TMEM35BQ8NCS4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM35BQ8NCS4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM35BQ8NCS4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TMEM35BQ8NCS4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.75■■□□□ 1.39
TMEM35BQ8NCS4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms