Protein–RNA interactions for Protein: Q8N9H8

EXD3, Exonuclease mut-7 homolog, humanhuman

Predictions only

Length 876 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3Q8N9H8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.18■□□□□ 0.98
EXD3Q8N9H8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
EXD3Q8N9H8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
EXD3Q8N9H8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 BX842568.3-201ENST00000418104 571 ntBASIC21.16■□□□□ 0.98
EXD3Q8N9H8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
EXD3Q8N9H8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.15■□□□□ 0.98
EXD3Q8N9H8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
EXD3Q8N9H8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
EXD3Q8N9H8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 AC009102.2-201ENST00000606772 1639 ntBASIC21.14■□□□□ 0.97
EXD3Q8N9H8 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
EXD3Q8N9H8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
EXD3Q8N9H8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
EXD3Q8N9H8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
EXD3Q8N9H8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
EXD3Q8N9H8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms