Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRTM2Q8N967 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
LRTM2Q8N967 ABHD17AP4-201ENST00000411545 909 ntBASIC18.42■□□□□ 0.54
LRTM2Q8N967 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.42■□□□□ 0.54
LRTM2Q8N967 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM2Q8N967 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM2Q8N967 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LRTM2Q8N967 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LRTM2Q8N967 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.41■□□□□ 0.54
LRTM2Q8N967 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LRTM2Q8N967 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.41■□□□□ 0.54
LRTM2Q8N967 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.41■□□□□ 0.54
LRTM2Q8N967 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
LRTM2Q8N967 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LRTM2Q8N967 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM2Q8N967 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM2Q8N967 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRTM2Q8N967 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.39■□□□□ 0.54
LRTM2Q8N967 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
LRTM2Q8N967 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LRTM2Q8N967 AC131274.2-201ENST00000580697 1507 ntBASIC18.39■□□□□ 0.54
LRTM2Q8N967 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRTM2Q8N967 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 SRP68-213ENST00000629930 165 ntTSL 5 BASIC18.39■□□□□ 0.53
LRTM2Q8N967 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.53
LRTM2Q8N967 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRTM2Q8N967 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRTM2Q8N967 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.38■□□□□ 0.53
LRTM2Q8N967 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LRTM2Q8N967 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.38■□□□□ 0.53
LRTM2Q8N967 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRTM2Q8N967 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.38■□□□□ 0.53
LRTM2Q8N967 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 AC079630.1-202ENST00000618127 1840 ntBASIC18.37■□□□□ 0.53
LRTM2Q8N967 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 AL137060.1-201ENST00000618151 2648 ntBASIC18.37■□□□□ 0.53
LRTM2Q8N967 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.37■□□□□ 0.53
LRTM2Q8N967 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
LRTM2Q8N967 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRTM2Q8N967 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LRTM2Q8N967 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRTM2Q8N967 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.36■□□□□ 0.53
LRTM2Q8N967 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.36■□□□□ 0.53
LRTM2Q8N967 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRTM2Q8N967 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 HES4-202ENST00000428771 1040 ntTSL 2 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.35■□□□□ 0.53
LRTM2Q8N967 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRTM2Q8N967 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms