Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 AC103724.3-201ENST00000564481 992 ntBASIC21.96■■□□□ 1.11
CPSF7Q8N684 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 AC019171.1-201ENST00000601251 1056 ntBASIC21.96■■□□□ 1.11
CPSF7Q8N684 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.96■■□□□ 1.11
CPSF7Q8N684 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.96■■□□□ 1.11
CPSF7Q8N684 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.95■■□□□ 1.11
CPSF7Q8N684 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.95■■□□□ 1.1
CPSF7Q8N684 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.95■■□□□ 1.1
CPSF7Q8N684 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CPSF7Q8N684 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.95■■□□□ 1.1
CPSF7Q8N684 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPSF7Q8N684 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 LONRF2P2-201ENST00000439212 571 ntBASIC21.94■■□□□ 1.1
CPSF7Q8N684 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.94■■□□□ 1.1
CPSF7Q8N684 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPSF7Q8N684 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.93■■□□□ 1.1
CPSF7Q8N684 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
CPSF7Q8N684 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 AL031848.2-201ENST00000607670 837 ntBASIC21.93■■□□□ 1.1
CPSF7Q8N684 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPSF7Q8N684 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
CPSF7Q8N684 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.92■■□□□ 1.1
CPSF7Q8N684 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPSF7Q8N684 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPSF7Q8N684 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CPSF7Q8N684 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPSF7Q8N684 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF7Q8N684 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF7Q8N684 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.91■■□□□ 1.1
CPSF7Q8N684 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.91■■□□□ 1.1
CPSF7Q8N684 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF7Q8N684 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPSF7Q8N684 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.9■■□□□ 1.1
CPSF7Q8N684 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CPSF7Q8N684 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPSF7Q8N684 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
CPSF7Q8N684 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPSF7Q8N684 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CPSF7Q8N684 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPSF7Q8N684 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.89■■□□□ 1.09
CPSF7Q8N684 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.88■■□□□ 1.09
CPSF7Q8N684 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.88■■□□□ 1.09
CPSF7Q8N684 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPSF7Q8N684 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms