Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 DUSP8P5-201ENST00000422884 1815 ntBASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.05■■□□□ 1.28
ATPAF2Q8N5M1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 AC079630.1-202ENST00000618127 1840 ntBASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
ATPAF2Q8N5M1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 AL117332.1-201ENST00000622628 974 ntBASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.03■■□□□ 1.28
ATPAF2Q8N5M1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 AL356740.2-201ENST00000601559 647 ntBASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ATPAF2Q8N5M1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 AC009102.2-201ENST00000606772 1639 ntBASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.01■■□□□ 1.27
ATPAF2Q8N5M1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
ATPAF2Q8N5M1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.99■■□□□ 1.27
ATPAF2Q8N5M1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 MIR3621-201ENST00000580529 85 ntBASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
ATPAF2Q8N5M1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 AC144652.1-201ENST00000609974 1624 ntBASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
ATPAF2Q8N5M1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.96■■□□□ 1.27
ATPAF2Q8N5M1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.96■■□□□ 1.27
ATPAF2Q8N5M1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC22.96■■□□□ 1.27
ATPAF2Q8N5M1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
ATPAF2Q8N5M1 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms