Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.11■■■□□ 2.09
DDX60Q8IY21 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC28.11■■■□□ 2.09
DDX60Q8IY21 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.11■■■□□ 2.09
DDX60Q8IY21 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC28.11■■■□□ 2.09
DDX60Q8IY21 AC092666.2-201ENST00000613287 246 ntBASIC28.11■■■□□ 2.09
DDX60Q8IY21 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DDX60Q8IY21 AC141586.4-201ENST00000624558 1573 ntBASIC28.1■■■□□ 2.09
DDX60Q8IY21 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 AC027612.3-201ENST00000413684 1047 ntBASIC28.1■■■□□ 2.09
DDX60Q8IY21 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
DDX60Q8IY21 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DDX60Q8IY21 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC28.1■■■□□ 2.09
DDX60Q8IY21 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC28.09■■■□□ 2.09
DDX60Q8IY21 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
DDX60Q8IY21 AC010525.1-201ENST00000585559 441 ntBASIC28.09■■■□□ 2.09
DDX60Q8IY21 TMEM202-AS1-202ENST00000565181 2325 ntBASIC28.09■■■□□ 2.09
DDX60Q8IY21 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
DDX60Q8IY21 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
DDX60Q8IY21 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC28.09■■■□□ 2.09
DDX60Q8IY21 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
DDX60Q8IY21 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
DDX60Q8IY21 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC28.08■■■□□ 2.09
DDX60Q8IY21 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC28.08■■■□□ 2.09
DDX60Q8IY21 AC135731.1-201ENST00000569415 2548 ntBASIC28.08■■■□□ 2.09
DDX60Q8IY21 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
DDX60Q8IY21 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 TSPY26P-201ENST00000476365 1326 ntBASIC28.07■■■□□ 2.08
DDX60Q8IY21 GRAMD4P2-201ENST00000423297 1097 ntBASIC28.07■■■□□ 2.08
DDX60Q8IY21 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.07■■■□□ 2.08
DDX60Q8IY21 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.07■■■□□ 2.08
DDX60Q8IY21 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.07■■■□□ 2.08
DDX60Q8IY21 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
DDX60Q8IY21 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.06■■■□□ 2.08
DDX60Q8IY21 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC28.06■■■□□ 2.08
DDX60Q8IY21 AC142381.3-201ENST00000568208 1670 ntBASIC28.06■■■□□ 2.08
DDX60Q8IY21 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC28.06■■■□□ 2.08
DDX60Q8IY21 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 IGHV3-19-201ENST00000521488 291 ntBASIC28.06■■■□□ 2.08
DDX60Q8IY21 AC012414.1-201ENST00000556676 535 ntBASIC28.06■■■□□ 2.08
DDX60Q8IY21 AC126544.1-201ENST00000580842 1059 ntBASIC28.06■■■□□ 2.08
DDX60Q8IY21 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
DDX60Q8IY21 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DDX60Q8IY21 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
DDX60Q8IY21 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC28.05■■■□□ 2.08
DDX60Q8IY21 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC28.05■■■□□ 2.08
DDX60Q8IY21 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
DDX60Q8IY21 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX60Q8IY21 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
DDX60Q8IY21 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DDX60Q8IY21 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC28.04■■■□□ 2.08
DDX60Q8IY21 AL499627.2-201ENST00000606283 725 ntBASIC28.04■■■□□ 2.08
DDX60Q8IY21 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
DDX60Q8IY21 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
DDX60Q8IY21 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
DDX60Q8IY21 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC28.02■■■□□ 2.08
DDX60Q8IY21 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC28.02■■■□□ 2.08
DDX60Q8IY21 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 AC133637.1-201ENST00000624115 1537 ntBASIC28.02■■■□□ 2.08
DDX60Q8IY21 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
DDX60Q8IY21 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 AICDA-202ENST00000537228 667 ntTSL 5 BASIC28.01■■■□□ 2.07
DDX60Q8IY21 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.01■■■□□ 2.07
DDX60Q8IY21 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
DDX60Q8IY21 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC28.01■■■□□ 2.07
DDX60Q8IY21 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms