Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.08■■□□□ 1.61
DHX40Q8IX18 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DHX40Q8IX18 AC242852.2-201ENST00000615738 1807 ntBASIC25.08■■□□□ 1.61
DHX40Q8IX18 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.08■■□□□ 1.61
DHX40Q8IX18 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
DHX40Q8IX18 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.08■■□□□ 1.61
DHX40Q8IX18 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.08■■□□□ 1.6
DHX40Q8IX18 AC079630.1-202ENST00000618127 1840 ntBASIC25.07■■□□□ 1.6
DHX40Q8IX18 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC25.07■■□□□ 1.6
DHX40Q8IX18 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DHX40Q8IX18 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DHX40Q8IX18 AC011551.1-201ENST00000614101 683 ntBASIC25.07■■□□□ 1.6
DHX40Q8IX18 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
DHX40Q8IX18 AC007375.3-201ENST00000600936 2314 ntBASIC25.07■■□□□ 1.6
DHX40Q8IX18 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
DHX40Q8IX18 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.06■■□□□ 1.6
DHX40Q8IX18 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.06■■□□□ 1.6
DHX40Q8IX18 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC25.06■■□□□ 1.6
DHX40Q8IX18 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.06■■□□□ 1.6
DHX40Q8IX18 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
DHX40Q8IX18 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
DHX40Q8IX18 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC25.05■■□□□ 1.6
DHX40Q8IX18 AC004987.1-201ENST00000428627 508 ntBASIC25.05■■□□□ 1.6
DHX40Q8IX18 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.05■■□□□ 1.6
DHX40Q8IX18 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.05■■□□□ 1.6
DHX40Q8IX18 ESRRAP2-201ENST00000418437 1549 ntBASIC25.05■■□□□ 1.6
DHX40Q8IX18 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
DHX40Q8IX18 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC25.05■■□□□ 1.6
DHX40Q8IX18 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.04■■□□□ 1.6
DHX40Q8IX18 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
DHX40Q8IX18 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
DHX40Q8IX18 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
DHX40Q8IX18 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
DHX40Q8IX18 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
DHX40Q8IX18 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC25.03■■□□□ 1.6
DHX40Q8IX18 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC25.03■■□□□ 1.6
DHX40Q8IX18 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.03■■□□□ 1.6
DHX40Q8IX18 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
DHX40Q8IX18 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.03■■□□□ 1.6
DHX40Q8IX18 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DHX40Q8IX18 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DHX40Q8IX18 TSPY13P-201ENST00000338964 914 ntBASIC25.02■■□□□ 1.6
DHX40Q8IX18 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
DHX40Q8IX18 ATP5G2P3-201ENST00000429083 425 ntBASIC25.02■■□□□ 1.6
DHX40Q8IX18 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.02■■□□□ 1.6
DHX40Q8IX18 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
DHX40Q8IX18 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
DHX40Q8IX18 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.01■■□□□ 1.59
DHX40Q8IX18 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DHX40Q8IX18 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
DHX40Q8IX18 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
DHX40Q8IX18 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
DHX40Q8IX18 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25■■□□□ 1.59
DHX40Q8IX18 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC25■■□□□ 1.59
DHX40Q8IX18 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
DHX40Q8IX18 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
DHX40Q8IX18 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25■■□□□ 1.59
DHX40Q8IX18 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25■■□□□ 1.59
DHX40Q8IX18 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25■■□□□ 1.59
DHX40Q8IX18 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25■■□□□ 1.59
DHX40Q8IX18 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
DHX40Q8IX18 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DHX40Q8IX18 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
DHX40Q8IX18 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
DHX40Q8IX18 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
DHX40Q8IX18 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC24.99■■□□□ 1.59
DHX40Q8IX18 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
DHX40Q8IX18 AC129492.7-201ENST00000622992 756 ntBASIC24.99■■□□□ 1.59
DHX40Q8IX18 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.98■■□□□ 1.59
DHX40Q8IX18 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.98■■□□□ 1.59
DHX40Q8IX18 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.98■■□□□ 1.59
DHX40Q8IX18 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.98■■□□□ 1.59
DHX40Q8IX18 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
DHX40Q8IX18 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
DHX40Q8IX18 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC24.97■■□□□ 1.59
DHX40Q8IX18 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms