Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC00346Q8IVM7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 AC079630.1-202ENST00000618127 1840 ntBASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC00346Q8IVM7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC00346Q8IVM7 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.85■□□□□ 0.77
LINC00346Q8IVM7 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC00346Q8IVM7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.83■□□□□ 0.77
LINC00346Q8IVM7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 C1orf229-201ENST00000623686 2258 ntBASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC00346Q8IVM7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 BX664725.1-201ENST00000438252 379 ntBASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC00346Q8IVM7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 RARRES2P1-201ENST00000474487 481 ntBASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 AC021242.3-201ENST00000607598 1377 ntBASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC00346Q8IVM7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC00346Q8IVM7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC00346Q8IVM7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms