Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTN4RL1Q86UN2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RTN4RL1Q86UN2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RTN4RL1Q86UN2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RTN4RL1Q86UN2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 AC034268.1-201ENST00000441047 882 ntBASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RTN4RL1Q86UN2 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 AL499627.2-201ENST00000606283 725 ntBASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 AC133637.1-201ENST00000624115 1537 ntBASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RTN4RL1Q86UN2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 YBX1P1-201ENST00000445822 960 ntBASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RTN4RL1Q86UN2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 AC010525.1-201ENST00000585559 441 ntBASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 IKBKGP1-201ENST00000612193 1073 ntBASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
RTN4RL1Q86UN2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 IGHV3-19-201ENST00000521488 291 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L2-201ENST00000561772 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 AC022517.1-201ENST00000592429 346 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L6-201ENST00000626483 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L1-201ENST00000627662 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L8-201ENST00000629013 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L3-201ENST00000630187 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L7-201ENST00000630678 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 DUX4L5-201ENST00000630834 1275 ntBASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
RTN4RL1Q86UN2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 AC138932.3-201ENST00000567634 1902 ntBASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 MIR572-201ENST00000384983 95 ntBASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 KRT18P5-201ENST00000436075 1291 ntBASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC24.4■■□□□ 1.5
RTN4RL1Q86UN2 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms