Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CSMD3Q7Z407 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 AC080038.1-201ENST00000611274 1154 ntBASIC15.84■□□□□ 0.13
CSMD3Q7Z407 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 GAS2L1P2-201ENST00000436355 1356 ntBASIC15.84■□□□□ 0.13
CSMD3Q7Z407 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
CSMD3Q7Z407 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CSMD3Q7Z407 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 MIR572-201ENST00000384983 95 ntBASIC15.83■□□□□ 0.12
CSMD3Q7Z407 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 AL354811.1-201ENST00000610286 706 ntBASIC15.83■□□□□ 0.12
CSMD3Q7Z407 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CSMD3Q7Z407 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 AC142086.6-201ENST00000621154 1765 ntBASIC15.82■□□□□ 0.12
CSMD3Q7Z407 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 CD37-213ENST00000598095 1598 ntTSL 2 BASIC15.82■□□□□ 0.12
CSMD3Q7Z407 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
CSMD3Q7Z407 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 AP005435.1-201ENST00000529293 1178 ntBASIC15.8■□□□□ 0.12
CSMD3Q7Z407 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 TMEM202-AS1-202ENST00000565181 2325 ntBASIC15.8■□□□□ 0.12
CSMD3Q7Z407 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 KRT18P6-201ENST00000555540 1265 ntBASIC15.8■□□□□ 0.12
CSMD3Q7Z407 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CSMD3Q7Z407 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CSMD3Q7Z407 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CSMD3Q7Z407 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms