Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
GDPD4Q6W3E5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 AC133561.4-201ENST00000566112 224 ntBASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
GDPD4Q6W3E5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
GDPD4Q6W3E5 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 AL138724.1-201ENST00000606771 1088 ntBASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 FP325331.1-202ENST00000623531 1380 ntBASIC22.61■■□□□ 1.21
GDPD4Q6W3E5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
GDPD4Q6W3E5 AC005837.3-201ENST00000612163 286 ntBASIC22.6■■□□□ 1.21
GDPD4Q6W3E5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
GDPD4Q6W3E5 AC144652.1-201ENST00000609974 1624 ntBASIC22.6■■□□□ 1.21
GDPD4Q6W3E5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 MIR3181-201ENST00000578512 73 ntBASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
GDPD4Q6W3E5 AC019069.1-201ENST00000610008 1333 ntBASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 AC011298.3-201ENST00000615796 283 ntBASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
GDPD4Q6W3E5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.58■■□□□ 1.2
GDPD4Q6W3E5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 pRNA.6-201ENST00000610482 90 ntBASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 pRNA.5-201ENST00000612139 90 ntBASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 pRNA.11-201ENST00000618423 90 ntBASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 pRNA.13-201ENST00000619112 90 ntBASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.57■■□□□ 1.2
GDPD4Q6W3E5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 DUX4L4-201ENST00000566884 1269 ntBASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
GDPD4Q6W3E5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 LINC01529-204ENST00000636474 1715 ntBASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 EDA-201ENST00000338901 1233 ntBASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 MIR4767-201ENST00000582827 78 ntBASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
GDPD4Q6W3E5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms