Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NHLRC1Q6VVB1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.16■□□□□ 0.82
NHLRC1Q6VVB1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
NHLRC1Q6VVB1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
NHLRC1Q6VVB1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 UNC93B8-201ENST00000511903 705 ntBASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NHLRC1Q6VVB1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NHLRC1Q6VVB1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 AC005703.6-201ENST00000623265 1329 ntBASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NHLRC1Q6VVB1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.11■□□□□ 0.81
NHLRC1Q6VVB1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 GUSBP5-201ENST00000418136 578 ntBASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 AC010997.5-201ENST00000609182 354 ntBASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NHLRC1Q6VVB1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms