Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 AC011298.3-201ENST00000615796 283 ntBASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.16■■□□□ 1.62
SWSAP1Q6NVH7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
SWSAP1Q6NVH7 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SWSAP1Q6NVH7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SWSAP1Q6NVH7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.15■■□□□ 1.62
SWSAP1Q6NVH7 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 pRNA.6-201ENST00000610482 90 ntBASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 pRNA.5-201ENST00000612139 90 ntBASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 pRNA.11-201ENST00000618423 90 ntBASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 pRNA.13-201ENST00000619112 90 ntBASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 AL136967.2-201ENST00000623968 743 ntBASIC25.14■■□□□ 1.62
SWSAP1Q6NVH7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
SWSAP1Q6NVH7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
SWSAP1Q6NVH7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.13■■□□□ 1.61
SWSAP1Q6NVH7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SWSAP1Q6NVH7 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SWSAP1Q6NVH7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SWSAP1Q6NVH7 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.13■■□□□ 1.61
SWSAP1Q6NVH7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 AF213884.3-201ENST00000563833 479 ntBASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.12■■□□□ 1.61
SWSAP1Q6NVH7 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.11■■□□□ 1.61
SWSAP1Q6NVH7 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SWSAP1Q6NVH7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
SWSAP1Q6NVH7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SWSAP1Q6NVH7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 AP001330.3-201ENST00000520123 633 ntBASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 AC136469.2-201ENST00000623944 1028 ntBASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
SWSAP1Q6NVH7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 MIR939-201ENST00000401314 82 ntBASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
SWSAP1Q6NVH7 FP325331.1-202ENST00000623531 1380 ntBASIC25.08■■□□□ 1.61
SWSAP1Q6NVH7 MIR935-201ENST00000401179 91 ntBASIC25.08■■□□□ 1.61
SWSAP1Q6NVH7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.08■■□□□ 1.61
SWSAP1Q6NVH7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.08■■□□□ 1.61
SWSAP1Q6NVH7 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.08■■□□□ 1.61
SWSAP1Q6NVH7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.08■■□□□ 1.6
SWSAP1Q6NVH7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.08■■□□□ 1.6
SWSAP1Q6NVH7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 AC144652.1-201ENST00000609974 1624 ntBASIC25.07■■□□□ 1.6
SWSAP1Q6NVH7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms