Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQA1Q5Y7H0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.93■□□□□ 0.94
HLA-DQA1Q5Y7H0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HLA-DQA1Q5Y7H0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HLA-DQA1Q5Y7H0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HLA-DQA1Q5Y7H0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
HLA-DQA1Q5Y7H0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 AC009102.2-201ENST00000606772 1639 ntBASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 AC008406.3-201ENST00000620001 1374 ntBASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HLA-DQA1Q5Y7H0 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQA1Q5Y7H0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
HLA-DQA1Q5Y7H0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.89■□□□□ 0.94
HLA-DQA1Q5Y7H0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQA1Q5Y7H0 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.89■□□□□ 0.93
HLA-DQA1Q5Y7H0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.89■□□□□ 0.93
HLA-DQA1Q5Y7H0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
HLA-DQA1Q5Y7H0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 SRD5A1P1-201ENST00000442297 786 ntBASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 AC131281.2-201ENST00000520478 145 ntBASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
HLA-DQA1Q5Y7H0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
HLA-DQA1Q5Y7H0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLA-DQA1Q5Y7H0 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 AL136116.3-201ENST00000402907 1138 ntBASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 AL512631.2-201ENST00000604634 923 ntBASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HLA-DQA1Q5Y7H0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms