Protein–RNA interactions for Protein: Q5VVS0

C1orf140, Putative uncharacterized protein C1orf140, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf140Q5VVS0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
C1orf140Q5VVS0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 AC079630.1-202ENST00000618127 1840 ntBASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
C1orf140Q5VVS0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
C1orf140Q5VVS0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 GUSBP5-201ENST00000418136 578 ntBASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.29■□□□□ 0.84
C1orf140Q5VVS0 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
C1orf140Q5VVS0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 KRT16P3-201ENST00000439127 1283 ntBASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 MIR6724-1-201ENST00000616420 92 ntBASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 MIR6724-2-201ENST00000616483 92 ntBASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 MIR6724-4-201ENST00000617390 92 ntBASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 MIR6724-3-201ENST00000622482 92 ntBASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.27■□□□□ 0.84
C1orf140Q5VVS0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.26■□□□□ 0.83
C1orf140Q5VVS0 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.25■□□□□ 0.83
C1orf140Q5VVS0 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
C1orf140Q5VVS0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1orf140Q5VVS0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
C1orf140Q5VVS0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1orf140Q5VVS0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
C1orf140Q5VVS0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms