Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YEL045CYEL045C 426 nt6.12□□□□□ -1.43
RKR1Q04781 RMR1YGL250W 726 nt6.12□□□□□ -1.43
RKR1Q04781 YIM1YMR152W 1098 nt6.12□□□□□ -1.43
RKR1Q04781 COX11YPL132W 903 nt6.12□□□□□ -1.43
RKR1Q04781 PUB1YNL016W 1362 nt6.12□□□□□ -1.43
RKR1Q04781 APC1YNL172W 5247 nt6.12□□□□□ -1.43
RKR1Q04781 TFC7YOR110W 1308 nt6.11□□□□□ -1.43
RKR1Q04781 AAD3YCR107W 1092 nt6.11□□□□□ -1.43
RKR1Q04781 YGR017WYGR017W 894 nt6.11□□□□□ -1.43
RKR1Q04781 PRD1YCL057W 2139 nt6.11□□□□□ -1.43
RKR1Q04781 YDR056CYDR056C 618 nt6.1□□□□□ -1.43
RKR1Q04781 RPL19BYBL027W 570 nt6.1□□□□□ -1.43
RKR1Q04781 YMR130WYMR130W 909 nt6.1□□□□□ -1.43
RKR1Q04781 OPY1YBR129C 987 nt6.1□□□□□ -1.43
RKR1Q04781 TRS120YDR407C 3870 nt6.1□□□□□ -1.43
RKR1Q04781 LSG1YGL099W 1923 nt6.1□□□□□ -1.43
RKR1Q04781 MAD2YJL030W 591 nt6.1□□□□□ -1.43
RKR1Q04781 NUP1YOR098C 3231 nt6.09□□□□□ -1.43
RKR1Q04781 ERG7YHR072W 2196 nt6.09□□□□□ -1.43
RKR1Q04781 HXT7YDR342C 1713 nt6.09□□□□□ -1.43
RKR1Q04781 HXT6YDR343C 1713 nt6.09□□□□□ -1.43
RKR1Q04781 PFK1YGR240C 2964 nt6.09□□□□□ -1.43
RKR1Q04781 CTT1YGR088W 1689 nt6.09□□□□□ -1.43
RKR1Q04781 RIM15YFL033C 5313 nt6.09□□□□□ -1.44
RKR1Q04781 ROD1YOR018W 2514 nt6.08□□□□□ -1.44
RKR1Q04781 PEX30YLR324W 1572 nt6.08□□□□□ -1.44
RKR1Q04781 SSU1YPL092W 1377 nt6.08□□□□□ -1.44
RKR1Q04781 PBN1YCL052C 1251 nt6.08□□□□□ -1.44
RKR1Q04781 AAP1YHR047C 2571 nt6.07□□□□□ -1.44
RKR1Q04781 MET3YJR010W 1536 nt6.07□□□□□ -1.44
RKR1Q04781 HRK1YOR267C 2280 nt6.07□□□□□ -1.44
RKR1Q04781 DNF2YDR093W 4839 nt6.07□□□□□ -1.44
RKR1Q04781 ACC1YNR016C 6702 nt6.06□□□□□ -1.44
RKR1Q04781 UPC2YDR213W 2742 nt6.06□□□□□ -1.44
RKR1Q04781 JEN1YKL217W 1851 nt6.06□□□□□ -1.44
RKR1Q04781 CLF1YLR117C 2064 nt6.05□□□□□ -1.44
RKR1Q04781 BRE4YDL231C 3378 nt6.05□□□□□ -1.44
RKR1Q04781 BIK1YCL029C 1323 nt6.04□□□□□ -1.44
RKR1Q04781 GAS3YMR215W 1575 nt6.04□□□□□ -1.44
RKR1Q04781 COG5YNL051W 1212 nt6.04□□□□□ -1.44
RKR1Q04781 MRH4YGL064C 1686 nt6.03□□□□□ -1.44
RKR1Q04781 UBP10YNL186W 2379 nt6.03□□□□□ -1.44
RKR1Q04781 RPG1YBR079C 2895 nt6.03□□□□□ -1.44
RKR1Q04781 YEL057CYEL057C 702 nt6.02□□□□□ -1.45
RKR1Q04781 MAG1YER142C 891 nt6.01□□□□□ -1.45
RKR1Q04781 GLO4YOR040W 858 nt6.01□□□□□ -1.45
RKR1Q04781 VPS53YJL029C 2469 nt6.01□□□□□ -1.45
RKR1Q04781 TPS3YMR261C 3165 nt6.01□□□□□ -1.45
RKR1Q04781 BNA1YJR025C 534 nt6.01□□□□□ -1.45
RKR1Q04781 MRT4YKL009W 711 nt6.01□□□□□ -1.45
RKR1Q04781 ISA1YLL027W 753 nt6.01□□□□□ -1.45
RKR1Q04781 JIP5YPR169W 1479 nt6□□□□□ -1.45
RKR1Q04781 YIL077CYIL077C 963 nt6□□□□□ -1.45
RKR1Q04781 YKR104WYKR104W 921 nt6□□□□□ -1.45
RKR1Q04781 POP4YBR257W 840 nt6□□□□□ -1.45
RKR1Q04781 EMP47YFL048C 1338 nt6□□□□□ -1.45
RKR1Q04781 ALG9YNL219C 1668 nt6□□□□□ -1.45
RKR1Q04781 SFK1YKL051W 1062 nt5.99□□□□□ -1.45
RKR1Q04781 EFM2YBR271W 1260 nt5.99□□□□□ -1.45
RKR1Q04781 FHL1YPR104C 2811 nt5.99□□□□□ -1.45
RKR1Q04781 HOYDL227C 1761 nt5.98□□□□□ -1.45
RKR1Q04781 MRPL7YDR237W 879 nt5.98□□□□□ -1.45
RKR1Q04781 YDR271CYDR271C 372 nt5.98□□□□□ -1.45
RKR1Q04781 SDO1YLR022C 753 nt5.98□□□□□ -1.45
RKR1Q04781 YOR008W-BYOR008W-B 102 nt5.98□□□□□ -1.45
RKR1Q04781 YBR056W-AYBR056W-A 201 nt5.98□□□□□ -1.45
RKR1Q04781 RPO31YOR116C 4383 nt5.98□□□□□ -1.45
RKR1Q04781 RMD1YDL001W 1293 nt5.97□□□□□ -1.45
RKR1Q04781 JLP1YLL057C 1239 nt5.97□□□□□ -1.45
RKR1Q04781 YNR061CYNR061C 660 nt5.97□□□□□ -1.45
RKR1Q04781 FOL2YGR267C 732 nt5.97□□□□□ -1.45
RKR1Q04781 PCL10YGL134W 1302 nt5.96□□□□□ -1.46
RKR1Q04781 YHR112CYHR112C 1137 nt5.96□□□□□ -1.46
RKR1Q04781 YPL025CYPL025C 558 nt5.96□□□□□ -1.46
RKR1Q04781 YPL041CYPL041C 624 nt5.96□□□□□ -1.46
RKR1Q04781 CHL1YPL008W 2586 nt5.96□□□□□ -1.46
RKR1Q04781 ALT2YDR111C 1524 nt5.96□□□□□ -1.46
RKR1Q04781 SIP5YMR140W 1470 nt5.95□□□□□ -1.46
RKR1Q04781 SKP2YNL311C 2292 nt5.95□□□□□ -1.46
RKR1Q04781 NOG1YPL093W 1944 nt5.95□□□□□ -1.46
RKR1Q04781 YOS9YDR057W 1629 nt5.95□□□□□ -1.46
RKR1Q04781 TRM8YDL201W 861 nt5.95□□□□□ -1.46
RKR1Q04781 AIR1YIL079C 1083 nt5.95□□□□□ -1.46
RKR1Q04781 NRK1YNL129W 723 nt5.95□□□□□ -1.46
RKR1Q04781 YLR049CYLR049C 1287 nt5.94□□□□□ -1.46
RKR1Q04781 TUP1YCR084C 2142 nt5.94□□□□□ -1.46
RKR1Q04781 ADP1YCR011C 3150 nt5.94□□□□□ -1.46
RKR1Q04781 YTA7YGR270W 4140 nt5.94□□□□□ -1.46
RKR1Q04781 MTC3YGL226W 372 nt5.93□□□□□ -1.46
RKR1Q04781 COX19YLL018C-A 297 nt5.93□□□□□ -1.46
RKR1Q04781 URA4YLR420W 1095 nt5.93□□□□□ -1.46
RKR1Q04781 UBP7YIL156W 3216 nt5.93□□□□□ -1.46
RKR1Q04781 PHO90YJL198W 2646 nt5.93□□□□□ -1.46
RKR1Q04781 PMA1YGL008C 2757 nt5.93□□□□□ -1.46
RKR1Q04781 ISR1YPR106W 1332 nt5.93□□□□□ -1.46
RKR1Q04781 YCR006CYCR006C 474 nt5.93□□□□□ -1.46
RKR1Q04781 YGR161W-CYGR161W-C 279 nt5.93□□□□□ -1.46
RKR1Q04781 VTH1YIL173W 4650 nt5.92□□□□□ -1.46
RKR1Q04781 VTH2YJL222W 4650 nt5.92□□□□□ -1.46
RKR1Q04781 OPY2YPR075C 1083 nt5.92□□□□□ -1.46
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms