Protein–RNA interactions for Protein: Q02199

NUP49, Nucleoporin NUP49/NSP49, yeastyeast

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP49Q02199 TEL1YBL088C 8364 nt4.06□□□□□ -1.76
NUP49Q02199 SKM1YOL113W 1968 nt4.05□□□□□ -1.76
NUP49Q02199 FRE7YOL152W 1863 nt4.05□□□□□ -1.76
NUP49Q02199 EMP47YFL048C 1338 nt4.05□□□□□ -1.76
NUP49Q02199 YDL012CYDL012C 324 nt4.05□□□□□ -1.76
NUP49Q02199 tS(AGA)D3tS(AGA)D3 83 nt4.05□□□□□ -1.76
NUP49Q02199 PAU17YLL025W 375 nt4.05□□□□□ -1.76
NUP49Q02199 HAL1YPR005C 885 nt4.05□□□□□ -1.76
NUP49Q02199 PBN1YCL052C 1251 nt4.05□□□□□ -1.76
NUP49Q02199 MNN1YER001W 2289 nt4.05□□□□□ -1.76
NUP49Q02199 AVT1YJR001W 1809 nt4.05□□□□□ -1.76
NUP49Q02199 PHO84YML123C 1764 nt4.04□□□□□ -1.76
NUP49Q02199 LPL1YOR059C 1353 nt4.04□□□□□ -1.76
NUP49Q02199 THI13YDL244W 1023 nt4.04□□□□□ -1.76
NUP49Q02199 YDR274CYDR274C 372 nt4.04□□□□□ -1.76
NUP49Q02199 DAM1YGR113W 1032 nt4.04□□□□□ -1.76
NUP49Q02199 LOH1YJL038C 660 nt4.04□□□□□ -1.76
NUP49Q02199 THI11YJR156C 1023 nt4.04□□□□□ -1.76
NUP49Q02199 UBI4YLL039C 1146 nt4.04□□□□□ -1.76
NUP49Q02199 LDB17YDL146W 1476 nt4.04□□□□□ -1.76
NUP49Q02199 PRM1YNL279W 1986 nt4.03□□□□□ -1.76
NUP49Q02199 SNF2YOR290C 5112 nt4.03□□□□□ -1.76
NUP49Q02199 PRE9YGR135W 777 nt4.03□□□□□ -1.76
NUP49Q02199 SOL4YGR248W 768 nt4.03□□□□□ -1.76
NUP49Q02199 tR(ACG)JtR(ACG)J 73 nt4.03□□□□□ -1.76
NUP49Q02199 NTR2YKR022C 969 nt4.03□□□□□ -1.76
NUP49Q02199 NMA1YLR328W 1206 nt4.03□□□□□ -1.76
NUP49Q02199 NOP13YNL175C 1212 nt4.03□□□□□ -1.76
NUP49Q02199 YPL077CYPL077C 723 nt4.03□□□□□ -1.76
NUP49Q02199 FAS2YPL231W 5664 nt4.03□□□□□ -1.76
NUP49Q02199 PTR2YKR093W 1806 nt4.02□□□□□ -1.77
NUP49Q02199 MEF2YJL102W 2460 nt4.02□□□□□ -1.77
NUP49Q02199 THS1YIL078W 2205 nt4.02□□□□□ -1.77
NUP49Q02199 DCV1YFR012W 609 nt4.02□□□□□ -1.77
NUP49Q02199 BIO2YGR286C 1128 nt4.02□□□□□ -1.77
NUP49Q02199 RFU1YLR073C 603 nt4.02□□□□□ -1.77
NUP49Q02199 MAC1YMR021C 1254 nt4.02□□□□□ -1.77
NUP49Q02199 YMR085WYMR085W 1299 nt4.02□□□□□ -1.77
NUP49Q02199 UBA3YPR066W 900 nt4.02□□□□□ -1.77
NUP49Q02199 GAS4YOL132W 1416 nt4.02□□□□□ -1.77
NUP49Q02199 IZH3YLR023C 1632 nt4.02□□□□□ -1.77
NUP49Q02199 MAG2YLR427W 2013 nt4.01□□□□□ -1.77
NUP49Q02199 NUP42YDR192C 1293 nt4.01□□□□□ -1.77
NUP49Q02199 SPR28YDR218C 1272 nt4.01□□□□□ -1.77
NUP49Q02199 ORM2YLR350W 651 nt4.01□□□□□ -1.77
NUP49Q02199 KEX1YGL203C 2190 nt4.01□□□□□ -1.77
NUP49Q02199 ATM1YMR301C 2073 nt4.01□□□□□ -1.77
NUP49Q02199 ARG4YHR018C 1392 nt4.01□□□□□ -1.77
NUP49Q02199 RRN11YML043C 1524 nt4□□□□□ -1.77
NUP49Q02199 IKS1YJL057C 2004 nt4□□□□□ -1.77
NUP49Q02199 YDC1YPL087W 954 nt4□□□□□ -1.77
NUP49Q02199 PDR5YOR153W 4536 nt4□□□□□ -1.77
NUP49Q02199 BUD8YLR353W 1812 nt4□□□□□ -1.77
NUP49Q02199 RAD1YPL022W 3303 nt4□□□□□ -1.77
NUP49Q02199 MRE11YMR224C 2079 nt3.99□□□□□ -1.77
NUP49Q02199 MIS1YBR084W 2928 nt3.99□□□□□ -1.77
NUP49Q02199 HMLALPHA1YCL066W 528 nt3.99□□□□□ -1.77
NUP49Q02199 MATALPHA1YCR040W 528 nt3.99□□□□□ -1.77
NUP49Q02199 RAD27YKL113C 1149 nt3.99□□□□□ -1.77
NUP49Q02199 MRM1YOR201C 1239 nt3.99□□□□□ -1.77
NUP49Q02199 MGR2YPL098C 342 nt3.99□□□□□ -1.77
NUP49Q02199 NCE102YPR149W 522 nt3.99□□□□□ -1.77
NUP49Q02199 SRB6YBR253W 366 nt3.99□□□□□ -1.77
NUP49Q02199 BRE4YDL231C 3378 nt3.99□□□□□ -1.77
NUP49Q02199 TRS85YDR108W 2097 nt3.99□□□□□ -1.77
NUP49Q02199 NHX1YDR456W 1902 nt3.99□□□□□ -1.77
NUP49Q02199 THI7YLR237W 1797 nt3.99□□□□□ -1.77
NUP49Q02199 YCF1YDR135C 4548 nt3.98□□□□□ -1.77
NUP49Q02199 YIL165CYIL165C 360 nt3.98□□□□□ -1.77
NUP49Q02199 YIL171WYIL171W 330 nt3.98□□□□□ -1.77
NUP49Q02199 KTR2YKR061W 1278 nt3.98□□□□□ -1.77
NUP49Q02199 ATG33YLR356W 594 nt3.98□□□□□ -1.77
NUP49Q02199 MTF1YMR228W 1026 nt3.98□□□□□ -1.77
NUP49Q02199 CUS2YNL286W 858 nt3.98□□□□□ -1.77
NUP49Q02199 YNL296WYNL296W 315 nt3.98□□□□□ -1.77
NUP49Q02199 YBR016WYBR016W 387 nt3.98□□□□□ -1.77
NUP49Q02199 OAF1YAL051W 3144 nt3.98□□□□□ -1.77
NUP49Q02199 MLF3YNL074C 1359 nt3.98□□□□□ -1.77
NUP49Q02199 SSH1YBR283C 1473 nt3.98□□□□□ -1.77
NUP49Q02199 CDC48YDL126C 2508 nt3.97□□□□□ -1.77
NUP49Q02199 GAL11YOL051W 3246 nt3.97□□□□□ -1.77
NUP49Q02199 YIL001WYIL001W 1542 nt3.97□□□□□ -1.77
NUP49Q02199 NOP58YOR310C 1536 nt3.97□□□□□ -1.77
NUP49Q02199 TAF12YDR145W 1620 nt3.97□□□□□ -1.77
NUP49Q02199 OCA4YCR095C 1089 nt3.97□□□□□ -1.77
NUP49Q02199 YER145C-AYER145C-A 438 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)CtQ(UUG)C 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)D1tQ(UUG)D1 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)D2tQ(UUG)D2 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)D3tQ(UUG)D3 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)E1tQ(UUG)E1 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)HtQ(UUG)H 72 nt3.97□□□□□ -1.77
NUP49Q02199 tQ(UUG)LtQ(UUG)L 72 nt3.97□□□□□ -1.77
NUP49Q02199 ECM15YBL001C 315 nt3.97□□□□□ -1.77
NUP49Q02199 YCL022CYCL022C 516 nt3.97□□□□□ -1.77
NUP49Q02199 VHS3YOR054C 2025 nt3.97□□□□□ -1.77
NUP49Q02199 NOC2YOR206W 2133 nt3.97□□□□□ -1.77
NUP49Q02199 ULS1YOR191W 4860 nt3.96□□□□□ -1.78
NUP49Q02199 TPA1YER049W 1935 nt3.96□□□□□ -1.78
NUP49Q02199 RRP45YDR280W 918 nt3.96□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms