Protein–RNA interactions for Protein: Q00578

SSL2, General transcription and DNA repair factor IIH helicase subunit XPB, yeastyeast

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL2Q00578 YLR225CYLR225C 1224 nt5.4□□□□□ -1.54
SSL2Q00578 ATP14YLR295C 375 nt5.4□□□□□ -1.54
SSL2Q00578 MAP2YBL091C 1266 nt5.4□□□□□ -1.54
SSL2Q00578 TEA1YOR337W 2280 nt5.4□□□□□ -1.55
SSL2Q00578 BOP2YLR267W 1713 nt5.4□□□□□ -1.55
SSL2Q00578 IMA1YGR287C 1770 nt5.39□□□□□ -1.55
SSL2Q00578 SYP1YCR030C 2613 nt5.39□□□□□ -1.55
SSL2Q00578 AIR2YDL175C 1035 nt5.39□□□□□ -1.55
SSL2Q00578 RRG1YDR065W 1098 nt5.39□□□□□ -1.55
SSL2Q00578 INO2YDR123C 915 nt5.39□□□□□ -1.55
SSL2Q00578 DON1YDR273W 1098 nt5.39□□□□□ -1.55
SSL2Q00578 KRE28YDR532C 1158 nt5.39□□□□□ -1.55
SSL2Q00578 ECM1YAL059W 639 nt5.39□□□□□ -1.55
SSL2Q00578 HRT3YLR097C 1035 nt5.39□□□□□ -1.55
SSL2Q00578 YLR307C-AYLR307C-A 264 nt5.39□□□□□ -1.55
SSL2Q00578 YML094C-AYML094C-A 402 nt5.39□□□□□ -1.55
SSL2Q00578 CUE5YOR042W 1236 nt5.39□□□□□ -1.55
SSL2Q00578 PRO2YOR323C 1371 nt5.39□□□□□ -1.55
SSL2Q00578 IFM1YOL023W 2031 nt5.38□□□□□ -1.55
SSL2Q00578 SET4YJL105W 1683 nt5.38□□□□□ -1.55
SSL2Q00578 RTC5YOR118W 1704 nt5.38□□□□□ -1.55
SSL2Q00578 HXT5YHR096C 1779 nt5.38□□□□□ -1.55
SSL2Q00578 SNM1YDR478W 597 nt5.38□□□□□ -1.55
SSL2Q00578 MF(ALPHA)2YGL089C 363 nt5.38□□□□□ -1.55
SSL2Q00578 Q0142Q0142 177 nt5.38□□□□□ -1.55
SSL2Q00578 CLC1YGR167W 702 nt5.38□□□□□ -1.55
SSL2Q00578 CTK2YJL006C 972 nt5.38□□□□□ -1.55
SSL2Q00578 LAC1YKL008C 1257 nt5.38□□□□□ -1.55
SSL2Q00578 CPR6YLR216C 1116 nt5.38□□□□□ -1.55
SSL2Q00578 YNL174WYNL174W 573 nt5.38□□□□□ -1.55
SSL2Q00578 ARG8YOL140W 1272 nt5.38□□□□□ -1.55
SSL2Q00578 TED1YIL039W 1422 nt5.38□□□□□ -1.55
SSL2Q00578 MPS3YJL019W 2049 nt5.38□□□□□ -1.55
SSL2Q00578 NGL2YMR285C 1548 nt5.38□□□□□ -1.55
SSL2Q00578 NOC4YPR144C 1659 nt5.37□□□□□ -1.55
SSL2Q00578 PEX19YDL065C 1029 nt5.37□□□□□ -1.55
SSL2Q00578 GRX4YER174C 735 nt5.37□□□□□ -1.55
SSL2Q00578 SUT1YGL162W 900 nt5.37□□□□□ -1.55
SSL2Q00578 YGL258W-AYGL258W-A 234 nt5.37□□□□□ -1.55
SSL2Q00578 IMP3YHR148W 552 nt5.37□□□□□ -1.55
SSL2Q00578 DAL2YIR029W 1032 nt5.37□□□□□ -1.55
SSL2Q00578 YOR289WYOR289W 756 nt5.37□□□□□ -1.55
SSL2Q00578 NUF2YOL069W 1356 nt5.37□□□□□ -1.55
SSL2Q00578 KCH1YJR054W 1494 nt5.37□□□□□ -1.55
SSL2Q00578 IMD3YLR432W 1572 nt5.37□□□□□ -1.55
SSL2Q00578 MLC1YGL106W 450 nt5.36□□□□□ -1.55
SSL2Q00578 ERG25YGR060W 930 nt5.36□□□□□ -1.55
SSL2Q00578 YGR182CYGR182C 354 nt5.36□□□□□ -1.55
SSL2Q00578 PAN5YHR063C 1140 nt5.36□□□□□ -1.55
SSL2Q00578 COG5YNL051W 1212 nt5.36□□□□□ -1.55
SSL2Q00578 MCT1YOR221C 1083 nt5.36□□□□□ -1.55
SSL2Q00578 RMI1YPL024W 726 nt5.36□□□□□ -1.55
SSL2Q00578 CAR1YPL111W 1002 nt5.36□□□□□ -1.55
SSL2Q00578 YPL191CYPL191C 1083 nt5.36□□□□□ -1.55
SSL2Q00578 YIL067CYIL067C 2037 nt5.36□□□□□ -1.55
SSL2Q00578 KAR2YJL034W 2049 nt5.35□□□□□ -1.55
SSL2Q00578 HXT7YDR342C 1713 nt5.35□□□□□ -1.55
SSL2Q00578 HXT6YDR343C 1713 nt5.35□□□□□ -1.55
SSL2Q00578 MAD3YJL013C 1548 nt5.35□□□□□ -1.55
SSL2Q00578 snR63snR63 255 nt5.35□□□□□ -1.55
SSL2Q00578 YCR100CYCR100C 951 nt5.35□□□□□ -1.55
SSL2Q00578 YDR282CYDR282C 1245 nt5.35□□□□□ -1.55
SSL2Q00578 ARG3YJL088W 1017 nt5.35□□□□□ -1.55
SSL2Q00578 YAL066WYAL066W 309 nt5.35□□□□□ -1.55
SSL2Q00578 BUD28YLR062C 378 nt5.35□□□□□ -1.55
SSL2Q00578 YBL036CYBL036C 774 nt5.35□□□□□ -1.55
SSL2Q00578 YMR086C-AYMR086C-A 339 nt5.35□□□□□ -1.55
SSL2Q00578 YIM2YMR151W 438 nt5.35□□□□□ -1.55
SSL2Q00578 ECM8YBR076W 1065 nt5.35□□□□□ -1.55
SSL2Q00578 TIP20YGL145W 2106 nt5.35□□□□□ -1.55
SSL2Q00578 YKR015CYKR015C 1707 nt5.34□□□□□ -1.55
SSL2Q00578 YGL185CYGL185C 1140 nt5.34□□□□□ -1.55
SSL2Q00578 HPM1YIL110W 1134 nt5.34□□□□□ -1.55
SSL2Q00578 EBP2YKL172W 1284 nt5.34□□□□□ -1.55
SSL2Q00578 GSP2YOR185C 663 nt5.34□□□□□ -1.55
SSL2Q00578 RRP15YPR143W 753 nt5.34□□□□□ -1.55
SSL2Q00578 MCM4YPR019W 2802 nt5.34□□□□□ -1.55
SSL2Q00578 SSB2YNL209W 1842 nt5.34□□□□□ -1.55
SSL2Q00578 KAP114YGL241W 3015 nt5.34□□□□□ -1.56
SSL2Q00578 RIT1YMR283C 1542 nt5.33□□□□□ -1.56
SSL2Q00578 YHL012WYHL012W 1482 nt5.33□□□□□ -1.56
SSL2Q00578 FKH1YIL131C 1455 nt5.33□□□□□ -1.56
SSL2Q00578 YDR034C-CYDR034C-C 1317 nt5.33□□□□□ -1.56
SSL2Q00578 YLR410W-AYLR410W-A 1317 nt5.33□□□□□ -1.56
SSL2Q00578 GIC2YDR309C 1152 nt5.33□□□□□ -1.56
SSL2Q00578 MOB2YFL034C-B 864 nt5.33□□□□□ -1.56
SSL2Q00578 YIL028WYIL028W 399 nt5.33□□□□□ -1.56
SSL2Q00578 YJR085CYJR085C 318 nt5.33□□□□□ -1.56
SSL2Q00578 YAL044W-AYAL044W-A 333 nt5.33□□□□□ -1.56
SSL2Q00578 UIP3YAR027W 708 nt5.33□□□□□ -1.56
SSL2Q00578 ATG16YMR159C 453 nt5.33□□□□□ -1.56
SSL2Q00578 IBA57YJR122W 1494 nt5.32□□□□□ -1.56
SSL2Q00578 TEC1YBR083W 1461 nt5.32□□□□□ -1.56
SSL2Q00578 IXR1YKL032C 1794 nt5.32□□□□□ -1.56
SSL2Q00578 ASA1YPR085C 1332 nt5.32□□□□□ -1.56
SSL2Q00578 PTC1YDL006W 846 nt5.32□□□□□ -1.56
SSL2Q00578 YER134CYER134C 537 nt5.32□□□□□ -1.56
SSL2Q00578 YFL012WYFL012W 447 nt5.32□□□□□ -1.56
SSL2Q00578 FMP48YGR052W 1110 nt5.32□□□□□ -1.56
SSL2Q00578 CAB4YGR277C 918 nt5.32□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms