Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DRB3P79483 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DRB3P79483 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 AC010980.1-201ENST00000587192 1142 ntBASIC18.76■□□□□ 0.59
HLA-DRB3P79483 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DRB3P79483 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 TSPY13P-201ENST00000338964 914 ntBASIC18.75■□□□□ 0.59
HLA-DRB3P79483 AC004448.1-201ENST00000458332 883 ntBASIC18.75■□□□□ 0.59
HLA-DRB3P79483 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HLA-DRB3P79483 AC079630.1-202ENST00000618127 1840 ntBASIC18.74■□□□□ 0.59
HLA-DRB3P79483 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HLA-DRB3P79483 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
HLA-DRB3P79483 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HLA-DRB3P79483 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
HLA-DRB3P79483 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HLA-DRB3P79483 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms