Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AC012414.1-201ENST00000556676 535 ntBASIC21.49■■□□□ 1.03
GABREP78334 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
GABREP78334 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
GABREP78334 DUSP8P4-201ENST00000399538 1761 ntBASIC21.48■■□□□ 1.03
GABREP78334 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.48■■□□□ 1.03
GABREP78334 MIR572-201ENST00000384983 95 ntBASIC21.48■■□□□ 1.03
GABREP78334 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.48■■□□□ 1.03
GABREP78334 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.48■■□□□ 1.03
GABREP78334 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GABREP78334 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.47■■□□□ 1.03
GABREP78334 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GABREP78334 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.47■■□□□ 1.03
GABREP78334 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GABREP78334 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GABREP78334 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GABREP78334 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GABREP78334 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GABREP78334 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GABREP78334 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GABREP78334 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
GABREP78334 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.47■■□□□ 1.03
GABREP78334 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.47■■□□□ 1.03
GABREP78334 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.47■■□□□ 1.03
GABREP78334 AL354811.1-201ENST00000610286 706 ntBASIC21.47■■□□□ 1.03
GABREP78334 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.47■■□□□ 1.03
GABREP78334 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.46■■□□□ 1.03
GABREP78334 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
GABREP78334 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.46■■□□□ 1.03
GABREP78334 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABREP78334 AC141586.4-201ENST00000624558 1573 ntBASIC21.46■■□□□ 1.03
GABREP78334 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.46■■□□□ 1.03
GABREP78334 CCDC92B-201ENST00000575506 885 ntBASIC21.46■■□□□ 1.03
GABREP78334 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GABREP78334 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GABREP78334 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
GABREP78334 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
GABREP78334 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GABREP78334 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.45■■□□□ 1.02
GABREP78334 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GABREP78334 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.45■■□□□ 1.02
GABREP78334 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.44■■□□□ 1.02
GABREP78334 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.44■■□□□ 1.02
GABREP78334 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.44■■□□□ 1.02
GABREP78334 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.44■■□□□ 1.02
GABREP78334 NTF6G-201ENST00000591094 616 ntBASIC21.44■■□□□ 1.02
GABREP78334 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GABREP78334 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
GABREP78334 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.44■■□□□ 1.02
GABREP78334 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.43■■□□□ 1.02
GABREP78334 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GABREP78334 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.43■■□□□ 1.02
GABREP78334 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GABREP78334 AL161729.1-201ENST00000604104 1402 ntBASIC21.43■■□□□ 1.02
GABREP78334 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GABREP78334 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
GABREP78334 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
GABREP78334 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GABREP78334 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GABREP78334 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
GABREP78334 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GABREP78334 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.42■■□□□ 1.02
GABREP78334 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.42■■□□□ 1.02
GABREP78334 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.42■■□□□ 1.02
GABREP78334 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
GABREP78334 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.41■■□□□ 1.02
GABREP78334 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
GABREP78334 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.41■■□□□ 1.02
GABREP78334 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.41■■□□□ 1.02
GABREP78334 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 KRT18P14-201ENST00000534205 1250 ntBASIC21.41■■□□□ 1.02
GABREP78334 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.41■■□□□ 1.02
GABREP78334 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.41■■□□□ 1.02
GABREP78334 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GABREP78334 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
GABREP78334 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
GABREP78334 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GABREP78334 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms