Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
YBX1P67809 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
YBX1P67809 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.98■■□□□ 1.11
YBX1P67809 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
YBX1P67809 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.98■■□□□ 1.11
YBX1P67809 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.98■■□□□ 1.11
YBX1P67809 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
YBX1P67809 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.98■■□□□ 1.11
YBX1P67809 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.98■■□□□ 1.11
YBX1P67809 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
YBX1P67809 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
YBX1P67809 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
YBX1P67809 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
YBX1P67809 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.96■■□□□ 1.11
YBX1P67809 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.96■■□□□ 1.11
YBX1P67809 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
YBX1P67809 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
YBX1P67809 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
YBX1P67809 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.95■■□□□ 1.1
YBX1P67809 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.95■■□□□ 1.1
YBX1P67809 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
YBX1P67809 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.95■■□□□ 1.1
YBX1P67809 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.95■■□□□ 1.1
YBX1P67809 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
YBX1P67809 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.95■■□□□ 1.1
YBX1P67809 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
YBX1P67809 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
YBX1P67809 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
YBX1P67809 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
YBX1P67809 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
YBX1P67809 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.94■■□□□ 1.1
YBX1P67809 MIR6724-1-201ENST00000616420 92 ntBASIC21.94■■□□□ 1.1
YBX1P67809 MIR6724-2-201ENST00000616483 92 ntBASIC21.94■■□□□ 1.1
YBX1P67809 MIR6724-4-201ENST00000617390 92 ntBASIC21.94■■□□□ 1.1
YBX1P67809 MIR6724-3-201ENST00000622482 92 ntBASIC21.94■■□□□ 1.1
YBX1P67809 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.94■■□□□ 1.1
YBX1P67809 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
YBX1P67809 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
YBX1P67809 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
YBX1P67809 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
YBX1P67809 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.93■■□□□ 1.1
YBX1P67809 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.93■■□□□ 1.1
YBX1P67809 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.93■■□□□ 1.1
YBX1P67809 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.93■■□□□ 1.1
YBX1P67809 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
YBX1P67809 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.93■■□□□ 1.1
YBX1P67809 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YBX1P67809 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
YBX1P67809 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
YBX1P67809 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.92■■□□□ 1.1
YBX1P67809 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
YBX1P67809 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
YBX1P67809 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
YBX1P67809 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.92■■□□□ 1.1
YBX1P67809 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.92■■□□□ 1.1
YBX1P67809 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.92■■□□□ 1.1
YBX1P67809 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
YBX1P67809 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.91■■□□□ 1.1
YBX1P67809 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.91■■□□□ 1.1
YBX1P67809 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.91■■□□□ 1.1
YBX1P67809 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
YBX1P67809 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.91■■□□□ 1.1
YBX1P67809 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.91■■□□□ 1.1
YBX1P67809 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
YBX1P67809 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
YBX1P67809 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.9■■□□□ 1.1
YBX1P67809 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.9■■□□□ 1.1
YBX1P67809 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
YBX1P67809 AL117332.1-201ENST00000622628 974 ntBASIC21.9■■□□□ 1.1
YBX1P67809 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
YBX1P67809 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms