Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 TERF1P2-201ENST00000583350 1212 ntBASIC30.46■■■□□ 2.47
ZC3H6P61129 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC30.46■■■□□ 2.47
ZC3H6P61129 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.46■■■□□ 2.47
ZC3H6P61129 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
ZC3H6P61129 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZC3H6P61129 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZC3H6P61129 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC30.45■■■□□ 2.47
ZC3H6P61129 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZC3H6P61129 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
ZC3H6P61129 AC010525.1-201ENST00000585559 441 ntBASIC30.45■■■□□ 2.47
ZC3H6P61129 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
ZC3H6P61129 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
ZC3H6P61129 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ZC3H6P61129 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
ZC3H6P61129 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
ZC3H6P61129 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
ZC3H6P61129 ALDH1A3-203ENST00000557963 1670 ntBASIC30.44■■■□□ 2.46
ZC3H6P61129 ME3-201ENST00000323418 1068 ntTSL 5 BASIC30.44■■■□□ 2.46
ZC3H6P61129 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.44■■■□□ 2.46
ZC3H6P61129 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.44■■■□□ 2.46
ZC3H6P61129 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ZC3H6P61129 AC133637.1-201ENST00000624115 1537 ntBASIC30.43■■■□□ 2.46
ZC3H6P61129 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
ZC3H6P61129 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.43■■■□□ 2.46
ZC3H6P61129 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.42■■■□□ 2.46
ZC3H6P61129 HLA-L-209ENST00000420110 1011 ntBASIC30.42■■■□□ 2.46
ZC3H6P61129 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
ZC3H6P61129 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.41■■■□□ 2.46
ZC3H6P61129 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.41■■■□□ 2.46
ZC3H6P61129 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
ZC3H6P61129 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ZC3H6P61129 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.41■■■□□ 2.46
ZC3H6P61129 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC30.41■■■□□ 2.46
ZC3H6P61129 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ZC3H6P61129 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
ZC3H6P61129 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC30.41■■■□□ 2.46
ZC3H6P61129 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC30.4■■■□□ 2.46
ZC3H6P61129 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.4■■■□□ 2.46
ZC3H6P61129 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H6P61129 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H6P61129 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.4■■■□□ 2.46
ZC3H6P61129 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H6P61129 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
ZC3H6P61129 LINC02228-203ENST00000641970 1355 ntBASIC30.4■■■□□ 2.46
ZC3H6P61129 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.39■■■□□ 2.46
ZC3H6P61129 AL161729.1-201ENST00000604104 1402 ntBASIC30.39■■■□□ 2.45
ZC3H6P61129 DUSP8P4-201ENST00000399538 1761 ntBASIC30.38■■■□□ 2.45
ZC3H6P61129 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ZC3H6P61129 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.38■■■□□ 2.45
ZC3H6P61129 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZC3H6P61129 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
ZC3H6P61129 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZC3H6P61129 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
ZC3H6P61129 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
ZC3H6P61129 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
ZC3H6P61129 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
ZC3H6P61129 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC30.37■■■□□ 2.45
ZC3H6P61129 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.36■■■□□ 2.45
ZC3H6P61129 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.36■■■□□ 2.45
ZC3H6P61129 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
ZC3H6P61129 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
ZC3H6P61129 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.36■■■□□ 2.45
ZC3H6P61129 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC30.36■■■□□ 2.45
ZC3H6P61129 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZC3H6P61129 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC30.36■■■□□ 2.45
ZC3H6P61129 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
ZC3H6P61129 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
ZC3H6P61129 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
ZC3H6P61129 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
ZC3H6P61129 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZC3H6P61129 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZC3H6P61129 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.35■■■□□ 2.45
ZC3H6P61129 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
ZC3H6P61129 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ZC3H6P61129 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
ZC3H6P61129 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
ZC3H6P61129 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
ZC3H6P61129 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZC3H6P61129 AC091060.1-201ENST00000623524 1766 ntBASIC30.34■■■□□ 2.45
ZC3H6P61129 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZC3H6P61129 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.34■■■□□ 2.45
ZC3H6P61129 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZC3H6P61129 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
ZC3H6P61129 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.34■■■□□ 2.45
ZC3H6P61129 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC30.34■■■□□ 2.45
ZC3H6P61129 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.33■■■□□ 2.45
ZC3H6P61129 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms