Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.95■□□□□ 0.94
SMSP52788 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SMSP52788 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
SMSP52788 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SMSP52788 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SMSP52788 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.94■□□□□ 0.94
SMSP52788 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.94■□□□□ 0.94
SMSP52788 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.94■□□□□ 0.94
SMSP52788 MIR4466-201ENST00000606121 54 ntBASIC20.94■□□□□ 0.94
SMSP52788 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SMSP52788 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SMSP52788 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
SMSP52788 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.93■□□□□ 0.94
SMSP52788 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMSP52788 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SMSP52788 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMSP52788 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.93■□□□□ 0.94
SMSP52788 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.93■□□□□ 0.94
SMSP52788 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.93■□□□□ 0.94
SMSP52788 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.93■□□□□ 0.94
SMSP52788 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SMSP52788 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SMSP52788 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
SMSP52788 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMSP52788 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMSP52788 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMSP52788 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SMSP52788 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.92■□□□□ 0.94
SMSP52788 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMSP52788 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMSP52788 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMSP52788 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMSP52788 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMSP52788 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.91■□□□□ 0.94
SMSP52788 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.91■□□□□ 0.94
SMSP52788 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMSP52788 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMSP52788 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.9■□□□□ 0.94
SMSP52788 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.9■□□□□ 0.94
SMSP52788 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMSP52788 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.9■□□□□ 0.94
SMSP52788 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMSP52788 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMSP52788 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMSP52788 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.9■□□□□ 0.94
SMSP52788 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMSP52788 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMSP52788 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.89■□□□□ 0.94
SMSP52788 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMSP52788 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMSP52788 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMSP52788 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.89■□□□□ 0.93
SMSP52788 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.89■□□□□ 0.93
SMSP52788 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.89■□□□□ 0.93
SMSP52788 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.89■□□□□ 0.93
SMSP52788 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMSP52788 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SMSP52788 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.89■□□□□ 0.93
SMSP52788 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SMSP52788 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SMSP52788 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
SMSP52788 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.88■□□□□ 0.93
SMSP52788 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMSP52788 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SMSP52788 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SMSP52788 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SMSP52788 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 AL512631.2-201ENST00000604634 923 ntBASIC20.87■□□□□ 0.93
SMSP52788 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.87■□□□□ 0.93
SMSP52788 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
SMSP52788 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMSP52788 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
SMSP52788 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.86■□□□□ 0.93
SMSP52788 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SMSP52788 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.86■□□□□ 0.93
SMSP52788 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms