Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.54■■□□□ 1.04
KNTC1P50748 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.54■■□□□ 1.04
KNTC1P50748 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
KNTC1P50748 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.53■■□□□ 1.04
KNTC1P50748 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.53■■□□□ 1.04
KNTC1P50748 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.53■■□□□ 1.04
KNTC1P50748 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.53■■□□□ 1.04
KNTC1P50748 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.53■■□□□ 1.04
KNTC1P50748 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
KNTC1P50748 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KNTC1P50748 CDCA4P2-201ENST00000441182 718 ntBASIC21.52■■□□□ 1.04
KNTC1P50748 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.52■■□□□ 1.04
KNTC1P50748 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
KNTC1P50748 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KNTC1P50748 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.52■■□□□ 1.04
KNTC1P50748 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
KNTC1P50748 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.52■■□□□ 1.03
KNTC1P50748 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KNTC1P50748 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
KNTC1P50748 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.52■■□□□ 1.03
KNTC1P50748 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
KNTC1P50748 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.51■■□□□ 1.03
KNTC1P50748 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
KNTC1P50748 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
KNTC1P50748 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.51■■□□□ 1.03
KNTC1P50748 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.51■■□□□ 1.03
KNTC1P50748 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
KNTC1P50748 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.51■■□□□ 1.03
KNTC1P50748 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.5■■□□□ 1.03
KNTC1P50748 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.5■■□□□ 1.03
KNTC1P50748 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
KNTC1P50748 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.5■■□□□ 1.03
KNTC1P50748 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.5■■□□□ 1.03
KNTC1P50748 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
KNTC1P50748 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
KNTC1P50748 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
KNTC1P50748 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
KNTC1P50748 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KNTC1P50748 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.49■■□□□ 1.03
KNTC1P50748 AP005435.1-201ENST00000529293 1178 ntBASIC21.49■■□□□ 1.03
KNTC1P50748 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.49■■□□□ 1.03
KNTC1P50748 MIR6084-201ENST00000622012 110 ntBASIC21.49■■□□□ 1.03
KNTC1P50748 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KNTC1P50748 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KNTC1P50748 AC141586.4-201ENST00000624558 1573 ntBASIC21.49■■□□□ 1.03
KNTC1P50748 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
KNTC1P50748 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.49■■□□□ 1.03
KNTC1P50748 ESRRAP2-201ENST00000418437 1549 ntBASIC21.49■■□□□ 1.03
KNTC1P50748 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KNTC1P50748 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.49■■□□□ 1.03
KNTC1P50748 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KNTC1P50748 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
KNTC1P50748 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.48■■□□□ 1.03
KNTC1P50748 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.48■■□□□ 1.03
KNTC1P50748 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KNTC1P50748 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.47■■□□□ 1.03
KNTC1P50748 AC026185.1-201ENST00000445748 174 ntBASIC21.47■■□□□ 1.03
KNTC1P50748 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
KNTC1P50748 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 AC133637.1-201ENST00000624115 1537 ntBASIC21.47■■□□□ 1.03
KNTC1P50748 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KNTC1P50748 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KNTC1P50748 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KNTC1P50748 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.46■■□□□ 1.03
KNTC1P50748 HLA-L-209ENST00000420110 1011 ntBASIC21.46■■□□□ 1.03
KNTC1P50748 AC010525.1-201ENST00000585559 441 ntBASIC21.46■■□□□ 1.03
KNTC1P50748 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.46■■□□□ 1.03
KNTC1P50748 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KNTC1P50748 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.46■■□□□ 1.03
KNTC1P50748 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
KNTC1P50748 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms